Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01447 ATGCTTACGTGCATAGCTCGTCCCAAGAAACCCGGGAGTGATTCGCTGAGTCCGCCCGATGATTCCGATTCTAAAAACCAAGCCATCAAATCCCTTACTTCTCAGCTTAAGGATATGGCGTTGAAAGCATCGGGAGCGTACAAGCATTGTAGCCCCTGCACGGGGCCGCCCACGCAGACTCGAATCCAGAGCAATATCGAGTCGGACACGGATTCGGATCGTTTTCGGTGGTCGTACCGGAGAACAGGGAGCTCAAGCTCGACGACGACGAGGACATGGGGGAAGGAGATGGAAGCGAGGCTGAAGGGGATTTCGAGTGGAGAAGGGACGCCGAATTCGTCGAGTGGACGGCGAGTGGACCCGGTGGTGTTGTTCGTGGAAGAGAACGAACCCAAGGAGTGGGTGGCGCAGGTGGAGCCCGGCGTTCTTATCACATTTGTTTCACTTCCGCGTGGCGGGAATGATCTGAAGCGAATACGGTTCAGTCGCGAGATGTTTAACAAATGGCAAGCTCAAAGATGGTGGGCAGAGAACTACGACAAAGTTATGGAACTTTACAACGTTCGAAGGTTTAACCGCCAAGCTTTCCCTCTTCCAACGCCACCAAGATCCGAAGATGAGAGCTCAAAGATCGAATCGGCGGAAGACAGCCCAGTGACACCTCCGTTAACAAGGGAACGTTTACCTCGTAATTTGTACCGCCCTACAGGAATTGGAATGGGATACTCATCCTCTGATTCATTTGATCATCAATCAATGCAATCCCGGCATCCCTATGACTCTAATTGTATGAACTCAACTCCGAAAGTTTCCACCATTAGCGCAGCCAAGACAGAAATATCATCAATGGACGCCTCCATGAGAAGTAGCTCATCCAGAGAAGCTGATCGCTCCGGGGATCTTTCAATCAGCAATGCCAGCGATCTGGAGACTGAATGGATTGAGCAGGATGAACCTGGGGTTTATATTACCATTAGAGCACTACCTGGTGGCAAAAGGGAGCTCAGAAGAGTCAGGTTCAGCCGAGAAAAATTTGGGGAGATGCATGCTAGATTATGGTGGGAAGAGAACCGCGCCAGAATACATGAACAATACTTGTGA 1101 0.5068 MLTCIARPKKPGSDSLSPPDDSDSKNQAIKSLTSQLKDMALKASGAYKHCSPCTGPPTQTRIQSNIESDTDSDRFRWSYRRTGSSSSTTTRTWGKEMEARLKGISSGEGTPNSSSGRRVDPVVLFVEENEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSREMFNKWQAQRWWAENYDKVMELYNVRRFNRQAFPLPTPPRSEDESSKIESAEDSPVTPPLTRERLPRNLYRPTGIGMGYSSSDSFDHQSMQSRHPYDSNCMNSTPKVSTISAAKTEISSMDASMRSSSSREADRSGDLSISNASDLETEWIEQDEPGVYITIRALPGGKRELRRVRFSREKFGEMHARLWWEENRARIHEQYL 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01447 366 MobiDBLite consensus disorder prediction 197 225 - -
Accr8g01447 366 MobiDBLite consensus disorder prediction 243 266 - -
Accr8g01447 366 ProSiteProfiles BRX domain profile. 311 366 IPR013591 -
Accr8g01447 366 Pfam Transcription factor BRX N-terminal domain 27 53 IPR027988 -
Accr8g01447 366 MobiDBLite consensus disorder prediction 1 27 - -
Accr8g01447 366 MobiDBLite consensus disorder prediction 281 303 - -
Accr8g01447 366 MobiDBLite consensus disorder prediction 49 69 - -
Accr8g01447 366 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 366 IPR044532 -
Accr8g01447 366 ProSiteProfiles BRX domain profile. 132 187 IPR013591 -
Accr8g01447 366 Pfam Transcription factor regulating root and shoot growth via Pin3 310 365 IPR013591 -
Accr8g01447 366 Pfam Transcription factor regulating root and shoot growth via Pin3 132 186 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01447 Accr-Chr8 35393650 35399997 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01447 1 366 Major Intrinsic Protein MIP AT1G31880 44.675 4.53e-91 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01447 - - gmx:100794109 617.076