Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01444 ATGAAGAAAGGAAACTTGGGGGGCCTCAACCTCAAGCTCAATGTTCCGGCTTCTGATCAGGTTTCCTTCGCCAAGTTTCTGACTGAAAGCGGGACGTTTAAGGATGGAGATCTGCTTGTCAATCGGGATGGAGTTCGAATTGTGACGGAGACTGCAGTCGAAGCGGCGCCCCCCATCACACCACTAGATAACCAGTTAAGTTTGTCAGACATAGACATAATCAAAGTGGTTGGCAAGGGAAATGGCGGCGTAGTGCAACTGGTGCAACACAAATGGACTAATCAGTTTTTTGCGCTAAAGGTTATCCAAATGAATATTGAGGAGTCCATGCGAAAGCAGATAGCACAAGAGCTTAAAATCAATCAGTCAGCTCAATGTCCATATGTTGTTATTTGCTATCAGTCATTCTATGATAATGGTGCCATATCAATCATCTTAGAGTACATGGATGGAGGTTCTTTAGCAGATCTTCTGAAGAAAGTTAAAAAAATTCCAGAAAAATATCTTGCTGCTATCTGTAAGCAGGTGCTTAAGGGTTTGATATATCTTCACCATGAAAAACATATTATCCACAGGGACTTAAAACCTTCTAATCTGTTGATAAACCATCGAGGGGAGGTAAAGATTACTGACTTTGGTGTGAGTGTAATAATGCAAACTACATCTGGCCAAGCAAATACTTTCATCGGCACATACAACTATATGTCTCCAGAGAGAATCAATGGAAGCCAGAATGGTTACAACTACAAAAGTGATATATGGAGTTTGGGACTGATATTGCTTGAGTGTGCTACTGGGCTGTTTCCATATACACCTCCAGATCAGGGTGAAAGATGGGAAAGTATTTTTGAGCTAATTGAAACAGTTGTTGATAAACCTCCTCCCTTTGCTCCATCTGATCAATTTTCTCCGGAATTTTGCTCGTTTGTCTCTGCATGTTTACAGAAAGACCCAACAGACAGACTGTCAGCTCAGGAGCTTATGGGACATCCTTTTGTTAACATGTATGGGGACTCGGATGTAGATCTTTCGGAATATTTCAAGAATGCAGGATCCCCTCTTGCGACTGTGCCGACTTCTACTTGA 1086 0.419 MKKGNLGGLNLKLNVPASDQVSFAKFLTESGTFKDGDLLVNRDGVRIVTETAVEAAPPITPLDNQLSLSDIDIIKVVGKGNGGVVQLVQHKWTNQFFALKVIQMNIEESMRKQIAQELKINQSAQCPYVVICYQSFYDNGAISIILEYMDGGSLADLLKKVKKIPEKYLAAICKQVLKGLIYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSVIMQTTSGQANTFIGTYNYMSPERINGSQNGYNYKSDIWSLGLILLECATGLFPYTPPDQGERWESIFELIETVVDKPPPFAPSDQFSPEFCSFVSACLQKDPTDRLSAQELMGHPFVNMYGDSDVDLSEYFKNAGSPLATVPTST 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01444 361 Pfam Protein kinase domain 73 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01444 361 FunFam Mitogen-activated protein kinase kinase 6 152 352 - -
Accr8g01444 361 SMART serkin_6 71 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01444 361 Gene3D Phosphorylase Kinase; domain 1 49 150 - -
Accr8g01444 361 ProSiteProfiles Protein kinase domain profile. 71 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01444 361 ProSitePatterns Serine/Threonine protein kinases active-site signature. 189 201 IPR008271 GO:0004672|GO:0006468
Accr8g01444 361 FunFam Mitogen-activated protein kinase kinase 6 41 150 - -
Accr8g01444 361 CDD PKc_MAPKK_plant_like 86 336 - -
Accr8g01444 361 SUPERFAMILY Protein kinase-like (PK-like) 66 338 IPR011009 -
Accr8g01444 361 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 16 350 - -
Accr8g01444 361 Gene3D Transferase(Phosphotransferase) domain 1 151 354 - -
Accr8g01444 361 ProSitePatterns Protein kinases ATP-binding region signature. 77 100 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01444 Accr-Chr8 35333736 35339036 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01444 1 328 MAP Kinase Kinase Gene Family AT4G29810 68.843 4.02e-173 483
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Accr8g01444 Pkinase 4e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01444 K20603 - gmx:100789734 610.527