Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01443 ATGGAGGAAATATCTTCGGCGGTTGCAGTTCCATTTACTCTTGGGAATTCGATCCCTAAGGACTCATCAGTGACAACACACATGGATATTGCTGGATTGAAATTTATGGCAAGTACAGCAACACTGATATTAAATCCTGCTATGGATAGCTGTGAATCTGTTGGAAGTGATGAAAATCATACAGATGCTAGTCCACAACATCAGATTACAGTATCTGCAGGGGAAAAAGAGAATCAAGTAGGTGCTTCGGATGTGCCAGAAACGTTCATTAAATGTAACCGTAATTGGGCCTCTGAGGAAACCCGTAATCAGGGATGGAGGGAAGATGAACGCAGGTCAGGGGTTGATTTTCAATGTCTGCATGATTCTAGTTCTCAATCTGTTGCCTGTGACAACTGTGGTATCCTTGGGGAGGAATCTTCAACTTCAGAGATCGATTTACCTAACGCTATGGAGGTTGAAAATAATGTCCATTGTATGTACAGTTTGGACGATTCATATACTGTGCAGGACATTATTTCTGTTCCAACAGATCCTGAGAGTGAAGATGGCAATGGGTCGGATGGGTCGGATCCAAAACTAGTTGCTTCACCTCTTGAGATGCCAATGGAGAAAAAAACGTGCGGAGCAAGCTTCCAGAAGGCTTTGGATTTGAATAGTGGACCTCTTTGGGGCTTTTCATCTGTTTGTGGTAGGAGACAGGAAATGGAGGATGCTATTGCTGCAAATCCTCATCTTTTGCAAGTTCCTTCGCATATGCTAATGGATAATAATGGGAATGAAAACACTGAAAATTCAGTTGCCCACTTTTTTGCTGTCTATGATGGTCATGGAGGCTGTCAGGTTGCTAATTATTGCTGGGAGCGTCTTCATTCAGTGCTTGTTGAGGAAATACATGATGCAGACTCAAGTTTGGATGGAAGTAGTTGGATGGACCATTGGGAGAAAGCATTCTCCAATTGTTTTCAGAAAGTTGATGACGAAGTTGCAGGAATTTGTGCTGAGAACAATGAAAACAATAATGATGGAACAAGATCTAGTAACAAACCACTTGCTCCTGAAACTGTTGGTTCCACTGCAGTGGTTGTCATTTTATGCCAAAACCACTTAATAGTTGCAAATTGTGGGGAATCAAGAGCAGTCTTGTGTCGTGGAAAAGAAGCACTGCCATTATCTTCTGATCACAAACCAAATAGAGAGGATGAGTGGGCCAGGATAGAAGCTGCAGGAGGAAGGATCATACAATGGAATGGGTACCGGGTGCTTGGCGTCTTGGCAGTGTCGAGGTCCATAGGTGATAGGTACTTAAAGCCATGGATAATTCCTACTCCAGAAGTCAAGTTCGTCCGTAGGGAGAAAAAAGACGAGTGCCTAATTCTGGCAAGTGATGGTTTATGGGATGTCATGACAAATGAAGAAGCCTGCGAGATTGCACGAAAACGAATCCTTCTTTGGCACAAGAAGCATGGTGATGGTGGATTGACGACAGGGACAGGGCCGGGCGAGGGAGTTGATCCTGCGGCACAGTCTGCTGCAGATTACTTATCTAGAGTTGCTCTCCAAAGGGGAAGTAAAGATAACATTTCTGTTATAGTGATAGACTTGAAGGGAAAAAGGAAATTTAAGACCAAGGCATGA 1638 0.4347 MEEISSAVAVPFTLGNSIPKDSSVTTHMDIAGLKFMASTATLILNPAMDSCESVGSDENHTDASPQHQITVSAGEKENQVGASDVPETFIKCNRNWASEETRNQGWREDERRSGVDFQCLHDSSSQSVACDNCGILGEESSTSEIDLPNAMEVENNVHCMYSLDDSYTVQDIISVPTDPESEDGNGSDGSDPKLVASPLEMPMEKKTCGASFQKALDLNSGPLWGFSSVCGRRQEMEDAIAANPHLLQVPSHMLMDNNGNENTENSVAHFFAVYDGHGGCQVANYCWERLHSVLVEEIHDADSSLDGSSWMDHWEKAFSNCFQKVDDEVAGICAENNENNNDGTRSSNKPLAPETVGSTAVVVILCQNHLIVANCGESRAVLCRGKEALPLSSDHKPNREDEWARIEAAGGRIIQWNGYRVLGVLAVSRSIGDRYLKPWIIPTPEVKFVRREKKDECLILASDGLWDVMTNEEACEIARKRILLWHKKHGDGGLTTGTGPGEGVDPAAQSAADYLSRVALQRGSKDNISVIVIDLKGKRKFKTKA 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01443 545 SUPERFAMILY PP2C-like 222 537 IPR036457 -
Accr8g01443 545 FunFam Protein phosphatase 2C 51 217 543 - -
Accr8g01443 545 Pfam Protein phosphatase 2C 225 528 IPR001932 -
Accr8g01443 545 SMART PP2C_4 213 533 IPR001932 -
Accr8g01443 545 ProSitePatterns PPM-type phosphatase domain signature. 270 278 IPR000222 GO:0043169
Accr8g01443 545 Gene3D - 211 545 IPR036457 -
Accr8g01443 545 PANTHER PROTEIN PHOSPHATASE 177 535 IPR015655 GO:0004722|GO:0006470
Accr8g01443 545 CDD PP2Cc 225 535 IPR001932 -
Accr8g01443 545 ProSiteProfiles PPM-type phosphatase domain profile. 223 535 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01443 Accr-Chr8 35326913 35329330 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01443 204 544 PP2C-type Phosphatase Gene Family AT4G26080 58.382 2.90e-137 403
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g01443 8 35326913 35329330 Accr12g01313 12 16992755 16995735 CCT
Accr8g01443 8 35326913 35329330 Accr8g01443 8 35326913 35329330 ECH