Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01415 ATGTCTGCGTGTTTAAGCGGAGCTAGTGGAAGAACGTATGGGTTCGATTTCGATTTTGTCAAATCTCCATCCACATCGACCAGAACCTCGCAAACATCTTCTTCTCCCTCTTCAACCATCTCGGAATCGAGTGATTCTCCACTTGCTATCTCCACTCGTAAATCTCGAACCCCTCGAAAGCGACCCAATCAAACTTACAATGAAGCTGCTGCAATGCTTTCCACAGCTTACCCAAATCTCTTCCCCTCCGATAGCCTGAAAAAACCAGGCAAGTTCACCAAAACAACGGATAATTTTGCGGATGAATCTTCAGAACTGTTTTTCCCTTTCCAAGTATTTGATACTTCCTCTTTCCTAATTCATCGCCAAGCAATCCAACAGAAGGCTGGTGGTAGTTTTCCGGTGGAGCCCAAAGCGGTTAATCTAACAGAAAAGGCGTGCCAGAGTCCGGGAGAGATTAGCTCGCGAGTGACTACTACTCAAGACTTCGAGGATGATTGCCAAGAAGATTTCGATGCTGAATCAATTCTCGATGAGGAAATCGGAGAGGGAATCGATAGCATCATGGGAAGCAGGGCTGAGGATTCACACGACGCGTCTTGTCACGACGAACTCGTGAATCCCCAGACTGTGGATTCCTCAGGATTTAATTTTGGCGGGAAATTCGATTTCCGGCCACGAGCTCTCCGTGGAGTCGATGAAGGGAATTATTGTTGGGGCTTTCCCGCGGTTGTCAATATGCTTGAAATCTCGCCGGAAGTGAAAAAGCCTACGCCGCCGGCATCGGTTTCGCCGGAGAAGAAAAAGAAGAAGATGAAGAAGGTGGAAAAGCTGATGAACATCGAATCGAAGATTCCGGAATTGCCGAAGGAGAGTTCGATTCCGAAGGCGAAATCGAATCCTGGTTTGCTGTTGAAATTGGATCACAACGAGGTTTTGAATGCTTGGTCTGACCGGAGTTCACCGTTCACCGGCGACAGTCCCGCCTCTAATGTGGCCGGAAATGATATCGCGGCACGGCTGGCAGAGATAGACTTGTTGTGGGAGAGTGGAGAAGGAGGGGTGATGAGAGAGGCCAGCGTTATGCGCTACAAAGAAAAGCGCCGTACACGTCTCTTCTCCAGGAAGATTAGATATCAAGTTAGAAAAGTCAACGCTGATCAACGGCCCAGAACGCAGGGGCGATTTGCGAGTAGGCCCAATTGTGGATCTGAGGTCCAAAGCTCAAAGGGTAAAGCAGGCCTTCCGTCCCATCATCACTCTCAATAA 1269 0.487 MSACLSGASGRTYGFDFDFVKSPSTSTRTSQTSSSPSSTISESSDSPLAISTRKSRTPRKRPNQTYNEAAAMLSTAYPNLFPSDSLKKPGKFTKTTDNFADESSELFFPFQVFDTSSFLIHRQAIQQKAGGSFPVEPKAVNLTEKACQSPGEISSRVTTTQDFEDDCQEDFDAESILDEEIGEGIDSIMGSRAEDSHDASCHDELVNPQTVDSSGFNFGGKFDFRPRALRGVDEGNYCWGFPAVVNMLEISPEVKKPTPPASVSPEKKKKKMKKVEKLMNIESKIPELPKESSIPKAKSNPGLLLKLDHNEVLNAWSDRSSPFTGDSPASNVAGNDIAARLAEIDLLWESGEGGVMREASVMRYKEKRRTRLFSRKIRYQVRKVNADQRPRTQGRFASRPNCGSEVQSSKGKAGLPSHHHSQ 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01415 422 MobiDBLite consensus disorder prediction 391 416 - -
Accr8g01415 422 MobiDBLite consensus disorder prediction 22 53 - -
Accr8g01415 422 ProSiteProfiles CCT domain profile. 357 399 IPR010402 GO:0005515
Accr8g01415 422 Pfam CCT motif 357 399 IPR010402 GO:0005515
Accr8g01415 422 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 1 402 - -
Accr8g01415 422 MobiDBLite consensus disorder prediction 22 63 - -
Accr8g01415 422 MobiDBLite consensus disorder prediction 383 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01415 Accr-Chr8 34774612 34777906 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01415 303 399 C2C2-CO-like Transcription Factor Family AT1G73870 45.045 9.51e-21 91.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Accr8g01415 CCT 9.5e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01415 - - qsa:O6P43_022368 431.795