Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01412 ATGGAGAATATCGGCGAAGAGTACAGGCATTACTGGGAAACCAACCGCTTCCTTCAAACCGAAGAGCTCGACAGTTGGGGATGGGACGAGGCCTTCTCCGGTTACTACGATTCCAGCTCCCCCGACGGTGCGGCCTCATCTGCTGCCTCCAAGAACATTGTCTCCGAGCGCAACCGCCGCAAGAAGCTCAACGAGAGACTCTTCGCTCTCAGAGCCGTCGTCCCCAACATTAGCAAGATGGATAAGGCTTCCATAATCAAGGACGCAATCGATTACATCCAACACTTGCACGAACAGGAGAGGAATATTGAGGCGGAGATATCGGAGCTTGAATCTGGGAAACAGATCAAGCAAAACTCAAGCGATATCGATTACGAGCAAGACCTACCTGTGTTGCTCAGGTCCAAGAAGAAGAAAACAGAGCAGAAGCAGCTTTACGATACCGTCACCAGTTCAAGAAATTGCCCGATCGAAGTCCTTGAGCTAAAGGTAACGTACATGGGAGAGAAGACGATCGTGGTGAGTTTGACGTGTAGTAAAAGGACGAACACAATGGTGAAACTGTGCGAAGTGTTCGAATCTCTGAAGCTGAAGATCGTTACGGCCAACATAACTTGTTTCTCAGGCAGGCTTGTGAAGACAGTCTTCGTGGAGGCAGAGGAAGAAGAGAAAGATCTGTTGGAGATAAGAATCCAAACGGCCATTGCAGCTCTTAATGATCCTGATAGCCCTATGAGCATCTAA 744 0.4892 MENIGEEYRHYWETNRFLQTEELDSWGWDEAFSGYYDSSSPDGAASSAASKNIVSERNRRKKLNERLFALRAVVPNISKMDKASIIKDAIDYIQHLHEQERNIEAEISELESGKQIKQNSSDIDYEQDLPVLLRSKKKKTEQKQLYDTVTSSRNCPIEVLELKVTYMGEKTIVVSLTCSKRTNTMVKLCEVFESLKLKIVTANITCFSGRLVKTVFVEAEEEEKDLLEIRIQTAIAALNDPDSPMSI 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01412 247 Coils Coil 93 113 - -
Accr8g01412 247 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 48 112 IPR036638 GO:0046983
Accr8g01412 247 FunFam Basic helix-loop-helix (BHLH) DNA-binding superfamily protein 43 115 - -
Accr8g01412 247 SMART finulus 53 102 IPR011598 GO:0046983
Accr8g01412 247 Gene3D - 44 113 IPR036638 GO:0046983
Accr8g01412 247 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 47 96 IPR011598 GO:0046983
Accr8g01412 247 Pfam Helix-loop-helix DNA-binding domain 54 97 IPR011598 GO:0046983
Accr8g01412 247 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 46 232 - -
Accr8g01412 247 Coils Coil 217 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01412 Accr-Chr8 34736781 34743728 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01412 1 218 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G57150 62.896 3.72e-86 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr8g01412 HLH 4.8e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01412 - - pcin:129308076 384.03