Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01404 ATGAAGAATTCGCCTCATCACCAGAGTGACATTGAGGCCGGAAGTACCAGCCACGGCGACCATGACGACGCGGAAAGTTCGTCTGATCCATTTGTTATTCCCAGAACAAAGGATGCTCCTATTGAACGCCTCAAACGTTGGAGGCAAGCTGCGCTTGTGCTTAATGCTTCTCGTCGGTTCCGGTACACGTTGGACTTGAAAAAAGAAGTGGAGAAGCGGCAAATATTGGGGAAGGTTAGGGCTCATGCAGAAGCAATTAGAGCTGCATATCTGTTCAAAGGTGCTATAAACGGCGGGAATGGAACCCCTCCTCATCCAACCCCAGTTGGTGACTTTGGGATTGGAAATGAACAACTTTCTTCAATTTCTAGGGATCATAAAGTTGATTTTCTTGAGCAATATGGAGGAGCTAGAGGGCTATCAGAATTGTTGAAATCTAGTACAGAGAAGGGGATTAATGGTGATGATACAGATATATTAAAACGAAGGAATGCTTTTGGTTCAAACAATTATCCTCGAAAGAAAGGAAGGAGTTTCTTGATGTTTTTGTGGGATGCTTGCAAGGATCTGACCTTGATTATATTACTGGTAGCTGCTGCAGCTTCATTAGCACTAGGAATAAAATCTGAGGGTATTAAGGAAGGATGGTATGATGGAGGAAGCATTGCTTTTGCAGTAATTCTTGTTGTTGCTGTTACAGCTATAAGTGATTATAAACAATCGCTTCAGTTTCAACATCTAAATGAGGAGAAGAGAAATATACGTTTAGAGGTTATAAGAGGTGGTAGAAGAGTTGAGATCTCTATATATGACATCGTTGTTGGTGATGTTGTACCCCTTAACATTGGTGATCAGGTCCCTGCCGATGGTATCTTGATCACTGGTCACTCTCTTGCTATTGATGAATCAAGTATGACTGGAGAGAGCAAGATAATCTATAAGGACTCTAAAAACCCTTTTCTGATGTCTGGATGTAAAGTTGCAGATGGCAGTGGCACCATGCTGGTACTCGCTGTTGGTTTAAATACTGAATGGGGGCTTCTGATGTCTAGTATTTCAGAAGAAAATGGTGAAGAAACGCCCTTACAGGTACGCTTAAATGGCGTTGCCACGTTCATTGGTATTGTTGGACTCTTTGTTGCTGTTATCGTTTTGATTGTGTTGTTGGCCAGATATTTCTCTGGGCATACTAGAGATGCAAATGGAAATGTTGAATTTAAGGCAGGCAAGACAAAAGTTGGTGATGCAATTAATGGGGCAATTAAAATAGTTACAGTTGCGGTGACCATTGTTGTAGTTGCTGTGCCTGAAGGGCTTCCTCTAGCAGTTACCTTAACACTTGCCTACTCGATGAGAAAAATGATGGCGGACAAAGCTTTGGTGAGGAGGCTTTCAGCCTGTGAGACAATGGGCTCTGCCACAACCATTTGCAGTGATAAGACTGGTACATTGACCATGAATCAGATGAGCGTGGTTGAGGCTTACAGTGGAGCAAAGAAGATTGCTCCAGCTCACAAGCCAGAGCTCTCTCGGAATCTCTGCGACTTGATCATTGAAGGTGTTGCACAGAACACCAATGGTAGTGTCTATACGGTTGGGGGTGATGTTGAGGTTTCTGGATCACCAACAGAAAAGGCAATTTTACATTGGGGCATTAAGCTGGGGATGAATTTTGAGGCTGCCAGATCAGAGTCATCAATTATTCATGTTTTTCCATTTAATTCAGAGAAAAAACGTGGAGGCGTTGCAGTAAGGACGTTTGACTCTCAAGTTCATATACATTGGAAAGGTGCTGCTGAGATAGTCCTAGCCTGTTGTGCATGGTATATTGATGAAAATGGCCAGTTAATGAAGATGGATGATGAGAAGATGAAATTTTTTCAAAAAGCTATTGACGATATGGCTGCTGCTAGTTTACGATGTGTTGCCATGGCATATAGATCATGTGAAATAACAAGTGTTCCAACTAGTGAAGAAGAACTTGCTCACTGGTCATTACCGGAGGATGATCTGATTTTACTGGCTATTTTTGGTCTAAAGGATCCCTGTCGACCTGGTGTCAAAGAAGCTGTACAACTTTGCCAAAAAGCAGGAGTTAAGGTACGAATGGTAACCGGTGACAATATAAAAACTGCTATATCAATTGCTGTAGAGTGTGGAATACTTCGATCATTGGCAGAAGCTGTGGAGTCAAACATCATTGAAGGAAAAACATTTCGTGCATTGCCAGATGACCAGAGAGAAAAAATTGCCGGAAGTTTATTGGTCATGGGACGGTCTTCTCCAAATGACAAGCTTCTGCTTGTGCAAGCATTGAGGAGGAAGGGGGATGTTGTGGCTGTTACTGGAGACGGAACTAATGATGCTCCTGCCCTACATGAGGCCGATATAGGTCTTGCAATGGGTATTCAAGGGACAGAAGTTGCTAAAGAGAGTTCAGACATCATTATTTTGGACGACAATTTTGCTTCGGTTGTGAAGGTTGTCAGATGGGGGCGGTCAGTATATGCAAATATTCAGAAATTTATCCAGTTCCAACTTACTGTCAATGTTGCAGCTCTTGTTATTAATGTTATTTCTGCAGTTTCATCAGGCAATGTCCCACTAAATGCAGTACAGCTTCTTTGGGTAAATCTTATCATGGATACACTTGGAGCGCTAGCCTTGGCAACTGAACCGCCTACGAATCATTTGATGGATCTGCCTCCAGTTGGTAGAAGTGAACCTCTTATAACAAACTACATGTGGAGGAATTTGCTTTTACAGGCAGCGTATCAAGTGTCTGTTTTGCTTGTACTGACTTTCCGAGGTACGACTATATTGAATCTGAAGCATTACCCTGACCATACAAAAGTGAAGAACACTTTAATATTCAATGCCTTTGTCCTCTGTCAAGTATTTAATGAATTTAATGCTCGAAAGCCAGATGAAAAGAACATATTCAGGGGAATCACAAAAAACTACCTCTTTATAGGGATAGTGGGTTTGACTGTCATACTTCAGATTATCATCATTGAATTCCTGGGGAAGTTCACTTCAACAGTGAGGCTTAATTGGCAGCAGTGGCTCACCTGCGTTATCATTGGAATTATCAGCTGGCCTCTTGCTCTCTTCGGGAAATTCATACCGGTGCCAAAGAGTCGCTGTCACGAGCCCTTTTATAAGCTTTGGTCCAAGCTACCAATACATGGCTGA 3195 0.4235 MKNSPHHQSDIEAGSTSHGDHDDAESSSDPFVIPRTKDAPIERLKRWRQAALVLNASRRFRYTLDLKKEVEKRQILGKVRAHAEAIRAAYLFKGAINGGNGTPPHPTPVGDFGIGNEQLSSISRDHKVDFLEQYGGARGLSELLKSSTEKGINGDDTDILKRRNAFGSNNYPRKKGRSFLMFLWDACKDLTLIILLVAAAASLALGIKSEGIKEGWYDGGSIAFAVILVVAVTAISDYKQSLQFQHLNEEKRNIRLEVIRGGRRVEISIYDIVVGDVVPLNIGDQVPADGILITGHSLAIDESSMTGESKIIYKDSKNPFLMSGCKVADGSGTMLVLAVGLNTEWGLLMSSISEENGEETPLQVRLNGVATFIGIVGLFVAVIVLIVLLARYFSGHTRDANGNVEFKAGKTKVGDAINGAIKIVTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTMNQMSVVEAYSGAKKIAPAHKPELSRNLCDLIIEGVAQNTNGSVYTVGGDVEVSGSPTEKAILHWGIKLGMNFEAARSESSIIHVFPFNSEKKRGGVAVRTFDSQVHIHWKGAAEIVLACCAWYIDENGQLMKMDDEKMKFFQKAIDDMAAASLRCVAMAYRSCEITSVPTSEEELAHWSLPEDDLILLAIFGLKDPCRPGVKEAVQLCQKAGVKVRMVTGDNIKTAISIAVECGILRSLAEAVESNIIEGKTFRALPDDQREKIAGSLLVMGRSSPNDKLLLVQALRRKGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVISAVSSGNVPLNAVQLLWVNLIMDTLGALALATEPPTNHLMDLPPVGRSEPLITNYMWRNLLLQAAYQVSVLLVLTFRGTTILNLKHYPDHTKVKNTLIFNAFVLCQVFNEFNARKPDEKNIFRGITKNYLFIGIVGLTVILQIIIIEFLGKFTSTVRLNWQQWLTCVIIGIISWPLALFGKFIPVPKSRCHEPFYKLWSKLPIHG 1064
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01404 1064 Pfam Ca2+-ATPase N terminal autoinhibitory domain 29 70 IPR024750 GO:0005516
Accr8g01404 1064 NCBIfam calcium-translocating P-type ATPase, PMCA-type 126 1044 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Accr8g01404 1064 Gene3D - 40 94 - -
Accr8g01404 1064 PRINTS P-type cation-transporting ATPase superfamily signature 675 686 - -
Accr8g01404 1064 PRINTS P-type cation-transporting ATPase superfamily signature 782 801 - -
Accr8g01404 1064 PRINTS P-type cation-transporting ATPase superfamily signature 301 315 - -
Accr8g01404 1064 PRINTS P-type cation-transporting ATPase superfamily signature 697 707 - -
Accr8g01404 1064 PRINTS P-type cation-transporting ATPase superfamily signature 477 491 - -
Accr8g01404 1064 PRINTS P-type cation-transporting ATPase superfamily signature 806 818 - -
Accr8g01404 1064 SFLD p-type atpase 459 834 IPR044492 -
Accr8g01404 1064 ProSitePatterns E1-E2 ATPases phosphorylation site. 479 485 IPR018303 -
Accr8g01404 1064 FunFam Calcium-transporting ATPase 39 95 - -
Accr8g01404 1064 MobiDBLite consensus disorder prediction 1 28 - -
Accr8g01404 1064 SUPERFAMILY HAD-like 475 887 IPR036412 -
Accr8g01404 1064 CDD P-type_ATPase_Ca_PMCA-like 159 915 - -
Accr8g01404 1064 FunFam Calcium-transporting ATPase 9 plasma membrane-type 331 501 - -
Accr8g01404 1064 FunFam Calcium-transporting ATPase 487 682 - -
Accr8g01404 1064 FunFam Calcium-transporting ATPase 231 353 - -
Accr8g01404 1064 Pfam E1-E2 ATPase 255 455 - -
Accr8g01404 1064 SUPERFAMILY Calcium ATPase, transduction domain A 255 350 IPR008250 -
Accr8g01404 1064 SFLD Haloacid Dehalogenase 459 834 - -
Accr8g01404 1064 Gene3D - 157 353 - -
Accr8g01404 1064 Gene3D - 474 827 IPR023214 -
Accr8g01404 1064 NCBIfam HAD-IC family P-type ATPase 417 500 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Accr8g01404 1064 NCBIfam HAD-IC family P-type ATPase 748 863 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Accr8g01404 1064 Gene3D - 487 682 IPR023299 GO:0000166
Accr8g01404 1064 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 484 679 IPR023299 GO:0000166
Accr8g01404 1064 FunFam Plasma membrane calcium-transporting ATPase 2 680 827 - -
Accr8g01404 1064 Pfam Cation transporting ATPase, C-terminus 867 1041 IPR006068 -
Accr8g01404 1064 Pfam haloacid dehalogenase-like hydrolase 474 796 - -
Accr8g01404 1064 SUPERFAMILY Calcium ATPase, transmembrane domain M 134 1044 IPR023298 -
Accr8g01404 1064 PRINTS Sodium/potassium-transporting ATPase signature 220 240 - -
Accr8g01404 1064 PRINTS Sodium/potassium-transporting ATPase signature 470 491 - -
Accr8g01404 1064 PRINTS Sodium/potassium-transporting ATPase signature 593 611 - -
Accr8g01404 1064 Pfam Cation transporter/ATPase, N-terminus 135 202 IPR004014 -
Accr8g01404 1064 Gene3D - 185 1032 - -
Accr8g01404 1064 PANTHER CATION TRANSPORTING ATPASE 88 1044 - -
Accr8g01404 1064 SMART Cation_ATPase_N_a_2 134 207 IPR004014 -
Accr8g01404 1064 FunFam Calcium-transporting ATPase 185 242 - -
Accr8g01404 1064 MobiDBLite consensus disorder prediction 1 35 - -
Accr8g01404 1064 FunFam Calcium-transporting ATPase 799 1046 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01404 Accr-Chr8 34564512 34581579 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01404 1 1059 Primary Pumps ATPases AT5G57110 71.402 0.0 1533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01404 K01537 - gmx:100820121 1603.19