Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01397 ATGGCTGTAGATCTGGTAAACCTCCCAAGGAAGATGGAAGAACAGATGGCTATTCAAGAAGCTGCTTCCGCTGGATTACAGAGCATGGAACATCTCATTCGTCTCCTCAATTCCTCTCAATCTCAGAATCAGAATCCCCACCGTCTTGACTGTTCCCAACTCACCGACTTGACCGTTTCCAAGTTCAAACAAGTCATCAACTTACTCAATCGCACCGGTCACGCTCGCTTTCGCCGTGCTCCCTCCAGTAATCCTACTCCTCCTTCTCCTTCCTCTGTTCCTCCAAATCCTTCCCAATCGAGCCACCTCCCTCTGAATTCGGCTCAGTCATCTCAATCTCAGGGGTTGACTCTTGATTTCGCCAAGCCCTGTACGGTCAAAACGTCATCGTTTAAATCTTCGCCTGAGTTATCCGTGTCTCAGTACTCTAAAGACACCTTGAGTATATCCCCTCCGATGTCCACCACTAGCTCCTCCTTTATGTCTTCTATCACCGGAGACGGTAGCGTTTCCGACGGAAAAATTGGCCCCTTACTTCCTCCTCCTCCGGCTCCCGTTGTCTCCTCCGGTAAACCCCCTCTCTCCTCGTCTCACCGGAAAAGGTGTCCCGATTCCGCCTTCCCTGAGAAAATTTCATCCTCTGGTCACTGTCATTGTACTAAGAGAAGGAAATCGCGAGTTAAAAAGACGATCCGTGTGCCGGCGATAAGCTCAAAGATCGCTGATATTCCGTCCGACGAGTTTTCTTGGAGAAAATACGGGCAGAAGCCGATCAAAGGCTCACCTTACCCTCGTGGATACTATAAGTGTAGTACCGTGAGAGGGTGTCCGGCAAGAAAGCATGTGGAGCGAGCTCAAGACGATCCCAAGATGCTGATTGTAACATACGAAGGGGAGCACCGTCATGTTCTGGAACTGCGTGCGGCGGAGTGCGGCGGTTCAGGCTTCGGGCTTAGCCTTCAAGCAAGCTAA 972 0.5082 MAVDLVNLPRKMEEQMAIQEAASAGLQSMEHLIRLLNSSQSQNQNPHRLDCSQLTDLTVSKFKQVINLLNRTGHARFRRAPSSNPTPPSPSSVPPNPSQSSHLPLNSAQSSQSQGLTLDFAKPCTVKTSSFKSSPELSVSQYSKDTLSISPPMSTTSSSFMSSITGDGSVSDGKIGPLLPPPPAPVVSSGKPPLSSSHRKRCPDSAFPEKISSSGHCHCTKRRKSRVKKTIRVPAISSKIADIPSDEFSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERAQDDPKMLIVTYEGEHRHVLELRAAECGGSGFGLSLQAS 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01397 323 FunFam WRKY transcription factor 65 228 305 - -
Accr8g01397 323 MobiDBLite consensus disorder prediction 73 114 - -
Accr8g01397 323 MobiDBLite consensus disorder prediction 146 209 - -
Accr8g01397 323 Pfam WRKY DNA -binding domain 246 302 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr8g01397 323 MobiDBLite consensus disorder prediction 98 114 - -
Accr8g01397 323 Gene3D WRKY domain 232 304 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr8g01397 323 ProSiteProfiles WRKY domain profile. 239 305 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr8g01397 323 SUPERFAMILY WRKY DNA-binding domain 242 302 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr8g01397 323 SMART WRKY_cls 244 304 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr8g01397 323 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 15 305 IPR044810 GO:0003700
Accr8g01397 323 MobiDBLite consensus disorder prediction 83 97 - -
Accr8g01397 323 Pfam Plant zinc cluster domain 199 242 IPR018872 -
Accr8g01397 323 MobiDBLite consensus disorder prediction 146 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01397 Accr-Chr8 34484018 34485255 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01397 1 302 WRKY Transcription Factor Family AT2G24570 57.962 1.33e-103 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Accr8g01397 WRKY 5.6e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01397 - - gmx:732589 362.073