Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01394 ATGGGAAACTGTCTGGCTCGTCAATCTGATTCTACAAATTCTCATCGCAACTCCAACAATGGCGCCAACAACAACCAATTGGGGAGCCGCCAACTACCCATTAGAGACAGTACTTCAAGACTCATGCAGAGTACAAGCAATTCTACTTTGCTTGGACGAAACAGCATGTCTGCAGGAAATAGCAGGCTATTTGGACCAAGTAGCAGTAACACATACACAACCAGCAACACTAATACATCTCTTTTAGGCTCTGATAGCAGCCAGATTTTAAAAGTAAGAGGTGAAGAGGATGAGTTTCCGAATGGGCAGATCTTGGATGTGGCAAATTTGAGAGAATTCACTCTTGAGGAACTGAAGGCAGCAACTAAAAATTTCAGACCTGACTCTGTACTAGGGGAGGGAGGCTTTGGCAGAGTGTACAAGGGTTTGCTTAAAGGGAAAGCATCATCAACAGCTACAAGAGATGGACGATTGGCCGTCGCAATCAAGAGATTGAACTCTGATAGCACACAAGGAGTTACGGAATGGCAGTCAGAGGTGAATTTCTTAGGAAGGCTTTCTCATCCTAACCTTGTCAAGTTGTTTGGATTTGGAAGGGAAAATGGAGAGCTGTTTCTGGTGTATGAATTCATGCACAAAGGCAGCTTGGCTAACCATCTATTTGGAAGAGGTTCAAATGTACGGCCACTTCCATGGGACACAAGGTTAAAGATTATAATTGGAGCAGCTAGGGGCCTAGACTTCTTACACTCATTAGAGAATAGAATCATATACAGAGATTTTAAGCCAGCCAATATCGTACTTGACAAGAACTACAATGCCAAGTTATCAGACTTTGGTTTGGCCAAATCGATTCCTTCTGGTGATAGAACTCATGTGACAACAAGGGTTATGGGATCTCACGGTTATGCTGCGCCTGAGTACGTTGCCACAGGTCACTTGACTGTGAAGAGTGATGTGTATGGATTTGGAATTGTTTTGGTGGAGATACTGACAGGCAAAGCAATACATGATATACGTAAGCATCTGGGTCAGGGCAAATCATTGATGGATTGGCTCAAATCAAACTTGTTGAGTAAAGGGAAGATGATAAACACAATGGACAGTAGATTGGGGGGGAAATATCCAACTAAGTTAGCATTACAAGTAGCTCAGCTAGCTCTTAAATGTGTCCAAATGGAACATAAATTTAGGCCATCAATGAGGGAAGTTGTCGAGACATTAGAAAAAATAGAGGCAGCTCAACTAAATGGTCGCCCAGATGGAGGTTGA 1272 0.4292 MGNCLARQSDSTNSHRNSNNGANNNQLGSRQLPIRDSTSRLMQSTSNSTLLGRNSMSAGNSRLFGPSSSNTYTTSNTNTSLLGSDSSQILKVRGEEDEFPNGQILDVANLREFTLEELKAATKNFRPDSVLGEGGFGRVYKGLLKGKASSTATRDGRLAVAIKRLNSDSTQGVTEWQSEVNFLGRLSHPNLVKLFGFGRENGELFLVYEFMHKGSLANHLFGRGSNVRPLPWDTRLKIIIGAARGLDFLHSLENRIIYRDFKPANIVLDKNYNAKLSDFGLAKSIPSGDRTHVTTRVMGSHGYAAPEYVATGHLTVKSDVYGFGIVLVEILTGKAIHDIRKHLGQGKSLMDWLKSNLLSKGKMINTMDSRLGGKYPTKLALQVAQLALKCVQMEHKFRPSMREVVETLEKIEAAQLNGRPDGG 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01394 423 CDD STKc_IRAK 131 411 - -
Accr8g01394 423 ProSitePatterns Serine/Threonine protein kinases active-site signature. 256 268 IPR008271 GO:0004672|GO:0006468
Accr8g01394 423 ProSiteProfiles Protein kinase domain profile. 125 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01394 423 Gene3D Phosphorylase Kinase; domain 1 109 210 - -
Accr8g01394 423 FunFam PTI1-like tyrosine-protein kinase 3 211 421 - -
Accr8g01394 423 FunFam Serine/threonine-protein kinase BIK1 93 210 - -
Accr8g01394 423 Pfam Protein tyrosine and serine/threonine kinase 129 408 IPR001245 GO:0004672|GO:0006468
Accr8g01394 423 PANTHER OS01G0588500 PROTEIN-RELATED 49 412 - -
Accr8g01394 423 ProSitePatterns Protein kinases ATP-binding region signature. 131 163 IPR017441 GO:0005524
Accr8g01394 423 MobiDBLite consensus disorder prediction 1 80 - -
Accr8g01394 423 Gene3D Transferase(Phosphotransferase) domain 1 211 419 - -
Accr8g01394 423 SUPERFAMILY Protein kinase-like (PK-like) 110 407 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01394 Accr-Chr8 34444728 34446903 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01394 102 412 Receptor kinase-like Gene Family AT4G02010 46.815 4.83e-85 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Accr8g01394 PK_Tyr_Ser-Thr 1.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01394 - - pcin:129308416 629.017