Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01391 ATGGCAATTGCAGCTTCAACCTCATCCTCCACCATGAGGATCAGCCATAGCCACAACAACAACAACAACCTCGTCGACGACAACTACGAGAGGAGGCAGCCGCCACCGGCAGCAGACACAGACGACGACGGTCACGAGCAGGACGTGGTCATGCCAGGGTTTCGGTTTCACCCAACAGAAGAAGAACTGGTAGAGTTCTACCTTCGCCGTAAGGTGGAGGGCAAGCCTTTCAATGTTGAGATCATTACTTTCCTCGATCTTTATCGATATGACCCTTGGGAGCTTCCTGGTTTGGCAGCGATAGGGGAGAAGGAATGGTACTTTTATGTGCCGAGAGATAGGAAGTATCGGAATGGCGACCGGCCGAACCGGGTAACGACTTCAGGGTATTGGAAGGCCACCGGAGCTGATAGAATGATCAAAACAGATGGCTTCAGATCCATTGGACTCAAGAAAACCCTAGTCTTTTACTCTGGTAAAGCTCCTAAAGGGATCAGAAGCAGTTGGATTATGAACGAGTATCGCTTGCCTCACCACGAAACCCAACGATTTCAAAAGGGTGAGATATCTCTTTGTCGAGTGTACAAGAGAGCAGGCGTAGAGGACCCTCTCTCTCTCCCTCGTTGTCTCCCCATAACATCATCATCAAGGGCTTCACACAATAAGAACAAGAACAACGCTAACCAATTTATGGTTCATCAGAACAGCATCAGATTCCTGGGACAACAACAATCACAACATCATCATGATCAATATCAAACCATAGACCAAGTTGCCGAAAAAAGTAATCATCAAACTGAGGAAAACAGTACTACCACCAATGATGCCAACAAGTACAACAACAATCTGCAGCAGCAGCAACCAAAGCATGCTCAACAACACACAGAAGCTGCAATAGCAACTTCCTCCTTCTTCCCCAAAGGCTCTATTACTAATAATTCATCCTCATTACCATCTAATGACAATATTAATAGAGCGATAATGGTGGAAGATGATGATCATCTCAATCGGCTAGCACCACAACAATCATCAATGCCTCTTCATAATTCGCTTCCCATTAACTCTTTCTCTGACAGATTGTGGGAGTGGAATCCAGTCCCCGAGCCAACAAACCGAGACTTCACCACCATGTCCTTCAAGTAA 1143 0.4628 MAIAASTSSSTMRISHSHNNNNNLVDDNYERRQPPPAADTDDDGHEQDVVMPGFRFHPTEEELVEFYLRRKVEGKPFNVEIITFLDLYRYDPWELPGLAAIGEKEWYFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIKTDGFRSIGLKKTLVFYSGKAPKGIRSSWIMNEYRLPHHETQRFQKGEISLCRVYKRAGVEDPLSLPRCLPITSSSRASHNKNKNNANQFMVHQNSIRFLGQQQSQHHHDQYQTIDQVAEKSNHQTEENSTTTNDANKYNNNLQQQQPKHAQQHTEAAIATSSFFPKGSITNNSSSLPSNDNINRAIMVEDDDHLNRLAPQQSSMPLHNSLPINSFSDRLWEWNPVPEPTNRDFTTMSFK 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01391 380 MobiDBLite consensus disorder prediction 32 50 - -
Accr8g01391 380 Pfam No apical meristem (NAM) protein 52 176 IPR003441 GO:0003677|GO:0006355
Accr8g01391 380 ProSiteProfiles NAC domain profile. 50 197 IPR003441 GO:0003677|GO:0006355
Accr8g01391 380 Gene3D NAC domain 59 200 IPR036093 GO:0003677|GO:0006355
Accr8g01391 380 MobiDBLite consensus disorder prediction 260 295 - -
Accr8g01391 380 SUPERFAMILY NAC domain 48 196 IPR036093 GO:0003677|GO:0006355
Accr8g01391 380 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 48 291 - -
Accr8g01391 380 MobiDBLite consensus disorder prediction 1 50 - -
Accr8g01391 380 FunFam NAC domain-containing protein 35 59 200 - -
Accr8g01391 380 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01391 Accr-Chr8 34422232 34424767 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01391 1 234 NAC Transcription Factor Family AT2G02450 67.797 1.09e-107 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr8g01391 NAM 2.9e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01391 - - pcin:129309516 505.753