Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01390 ATGGCAATTGCAGCTTCAACCTCATCCTCCACCATGAGGATCAGCCATAGCCACAACAACAACAACAACCTCGTCGACGACAACTACGAGAGGAGGCAGCCGCCACCGGCAGCAGACACAGACGACGACGGTCACGAGCAGGACGTGGTCATGCCAGGGTTTCGGTTTCACCCAACAGAAGAAGAACTGGTAGAGTTCTACCTTCGCCGTAAGGTGGAGGGCAAGCCTTTCAATGTTGAGATCATTACTTTCCTCGATCTTTATCGATATGACCCTTGGGAGCTTCCTGGTTTGGCAGCGATAGGGGAGAAGGAATGGTACTTTTATGTGCCGAGAGATAGGAAGTATCGGAATGGCGACCGGCCGAACCGGGTAACGACTTCAGGGTATTGGAAGGCCACCGGAGCTGATAGAATGATCAAAACAGATGGCTTCAGATCCATTGGACTCAAGAAAACCCTAGTCTTTTACTCTGGTAAAGCTCCTAAAGGGATCAGAAGCAGTTGGATTATGAACGAGTATCGCTTGCCTCACCACGAAACCCAACGATTTCAAAAGGGTGAGATATCTCTTTGTCGAGTGTACAAGAGAGCAGGCGTAGAGGACCCTCTCTCTCTCCCTCGTTGTCTCCCCATAACATCATCATCAAGGGCTTCACACAATAAGAACAAGAACAACGCTAACCAATTTATGGTTCATCAGAACAGCATCAGATTCCTGGGACAACAACAATCACAACATCATCATGATCAATATCAAACCATAGACCAAGTTGCCGAAAAAAGTAATCATCAAACTGAGGAAAACAGTACTACCACCAATGATGCCAACAAGTACAACAACAATCTGCAGCAGCAGCAACCAAAGCATGCTCAACAACACACAGAAGCTGCAATAGCAACTTCCTCCTTCTTCCCCAAAGGCTCTATTACTAATAATTCATCCTCATTACCATCTAATGACAATATTAATAGAGCGATAATGGTGGAAGATGATGATCATCTCAATCGGCTAGCAGTAAGTTATAATCAGCAGTTGCAGCACTTCAATAACATTTATGCTTCTGCTGCTGCTTCTCAAGGTCATCAGCAATATAATTATCAGCCCCCCATTATGATGCAGTTCTCTAATAATATTGTGTTGCAGCCACAACAATCATCAATGCCTCTTCATAATTCGCTTCCCATTAACTCTTTCTCTGACAGATTGTGGGAGTGGAATCCAGTCCCCGAGCCAACAAACCGAGACTTCACCACCATGTCCTTCAAGTAA 1272 0.4544 MAIAASTSSSTMRISHSHNNNNNLVDDNYERRQPPPAADTDDDGHEQDVVMPGFRFHPTEEELVEFYLRRKVEGKPFNVEIITFLDLYRYDPWELPGLAAIGEKEWYFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIKTDGFRSIGLKKTLVFYSGKAPKGIRSSWIMNEYRLPHHETQRFQKGEISLCRVYKRAGVEDPLSLPRCLPITSSSRASHNKNKNNANQFMVHQNSIRFLGQQQSQHHHDQYQTIDQVAEKSNHQTEENSTTTNDANKYNNNLQQQQPKHAQQHTEAAIATSSFFPKGSITNNSSSLPSNDNINRAIMVEDDDHLNRLAVSYNQQLQHFNNIYASAAASQGHQQYNYQPPIMMQFSNNIVLQPQQSSMPLHNSLPINSFSDRLWEWNPVPEPTNRDFTTMSFK 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01390 423 MobiDBLite consensus disorder prediction 260 297 - -
Accr8g01390 423 SUPERFAMILY NAC domain 48 196 IPR036093 GO:0003677|GO:0006355
Accr8g01390 423 MobiDBLite consensus disorder prediction 32 50 - -
Accr8g01390 423 ProSiteProfiles NAC domain profile. 50 197 IPR003441 GO:0003677|GO:0006355
Accr8g01390 423 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 48 291 - -
Accr8g01390 423 Gene3D NAC domain 59 200 IPR036093 GO:0003677|GO:0006355
Accr8g01390 423 MobiDBLite consensus disorder prediction 1 50 - -
Accr8g01390 423 MobiDBLite consensus disorder prediction 1 28 - -
Accr8g01390 423 FunFam NAC domain-containing protein 35 59 200 - -
Accr8g01390 423 Pfam No apical meristem (NAM) protein 52 176 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01390 Accr-Chr8 34422232 34424767 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01390 1 234 NAC Transcription Factor Family AT2G02450 65.164 1.86e-107 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr8g01390 NAM 3.6e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01390 - - pcin:129309516 546.199