Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01386 ATGACACTCATAAACCAGAGGATTCATAGTGAGTTTTGTAACTGTGCAGTGGAACATCCTTCACTTTCTCAAGTTATTCAGGTCCCCATGTCTATGCTAGGTAGCTCCGGAGCAGTTACGGTTTTGGTGGTAGTCATAATATTGCTCATCCTATTGTTGATCCTTGTGTTTATATGTCGGAAGCGTATCAAACCTGCATTTCAGACGAAAGCAAAACCTCCAATAGAGGTAATGGAGATAATAGCTCCTTCAAAGAAGCAGCAAGGATCAATGGACTTTTTTAGTGGCAGTGTTCAAGAAATGAGCCATTTTGACAGTCAGACCCTGAAGAAGGCAACAATGAATTTTCATCCTGATAATTTTCTTGGAAGTGGTGGATATGGTCCTGTCTATCGGGGGAAGTTGTCAGATGGGAGACTAATTGCAGTGAAGACACTGAATCTGAACAAAGCACAACAAGGAGAAAAACAGTTTCTGTCAGAGGTGAGATTGATCACAAGCATCCAACACAAAAATCTTGTTCGTCTCCTCGGGTGCTGCATTGATGGGCCTCAAAGGACCCTTGTGTATGAATACATGAAGAACAGAAGTTTGGACCTCATAATCAATGGACACAGTGATCAGTTTCTGGATTGGAGCACTAGGTTCCAAATCATTCTTGGAATTGCACGGGGGTTGCAATACCTGCACGAGGATTCACACATGAGAATAGTTCACAGAGACATCAAAGCAAGCAATATTCTTCTGGATGACAAGTTTCACCCCAAGATTGGAGACTTTGGACTGGCTAGGTTCTTCCCTGAAGACGATTGCCTCAGTACCCAAATTGCTGGAACACTAGGCTATACGGCTCCTGAATATGCTACGAAAGGAGAACTATCAGAAAAGGTAGACATATACAGTTTTGGGGTTCTATTGCTCGAAATCATCAGTTGTAGAATGAACACAGATTTTACTTTACCATCAGGAATGCAGTACCTTCCTGAATACGCGTGGAAGCTCTACGAGAAATCGATGCTGACCGATCTGATAGATCCGAAACTGCGAGAACACGGGTTTGTAGAGAAGGATGTAATGCAGGCAATTCATGTGGCTTTGTTGTGTATTCAATCTAGTCCAAATCTGAGACCTCCCATGTCAGAGATTGTAGCATTGTTAACCTTCAAAATTGAAATGGTTAGGACTCCAATGAGACCAATATTCCTTGATCTGAGGCATAAAGTGGCTGTTGCTGATAAAGACAAGGATGATGATTATGAGAATTGA 1266 0.421 MTLINQRIHSEFCNCAVEHPSLSQVIQVPMSMLGSSGAVTVLVVVIILLILLLILVFICRKRIKPAFQTKAKPPIEVMEIIAPSKKQQGSMDFFSGSVQEMSHFDSQTLKKATMNFHPDNFLGSGGYGPVYRGKLSDGRLIAVKTLNLNKAQQGEKQFLSEVRLITSIQHKNLVRLLGCCIDGPQRTLVYEYMKNRSLDLIINGHSDQFLDWSTRFQIILGIARGLQYLHEDSHMRIVHRDIKASNILLDDKFHPKIGDFGLARFFPEDDCLSTQIAGTLGYTAPEYATKGELSEKVDIYSFGVLLLEIISCRMNTDFTLPSGMQYLPEYAWKLYEKSMLTDLIDPKLREHGFVEKDVMQAIHVALLCIQSSPNLRPPMSEIVALLTFKIEMVRTPMRPIFLDLRHKVAVADKDKDDDYEN 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01386 421 SMART serkin_6 116 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01386 421 Coils Coil 415 421 - -
Accr8g01386 421 CDD STKc_IRAK 122 387 - -
Accr8g01386 421 Gene3D Phosphorylase Kinase; domain 1 78 192 - -
Accr8g01386 421 SUPERFAMILY Protein kinase-like (PK-like) 95 389 IPR011009 -
Accr8g01386 421 ProSitePatterns Serine/Threonine protein kinases active-site signature. 237 249 IPR008271 GO:0004672|GO:0006468
Accr8g01386 421 ProSiteProfiles Protein kinase domain profile. 116 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01386 421 Pfam Protein kinase domain 118 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01386 421 FunFam Cysteine-rich receptor-like protein kinase 10 80 192 - -
Accr8g01386 421 FunFam Cysteine-rich receptor-like protein kinase 2 193 394 - -
Accr8g01386 421 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 38 401 - -
Accr8g01386 421 Gene3D Transferase(Phosphotransferase) domain 1 193 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01386 Accr-Chr8 34359587 34361916 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01386 39 402 Receptor kinase-like Gene Family AT1G56120 45.753 2.24e-99 314
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr8g01386 Pkinase 1.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01386 - - gmx:100799624 543.117