Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01323 ATGGCTCCGTCGCCGGTGGATCACAACAGCGAGTCCACATCCAGTGAGAACCAGAGATCTATTCCTACGCCGTTCCTCACCAAGACGTATCAGCTTGTCGATGATCTCACCATAGACGATGTGATTTCCTGGAACGAAGATGGATCTACTTTCATCGTTTGGAACCCTACCGAATTCGCCAGAGATTTCCTTTCTAAATATTTTAAGCACAACAACTTCTCTAGCTTTGTTCGCAAACTCAACACCTATGGATTCAAAAAGGTTGTAGGAATTCTCGAACGAGTGTTTCTGCCGAGGCGAGAAACGGCTTCTGTGCGAAATACAACGACGGAAGATTTCGACACCTTCGACGCCAACGTTGCCTGCAGCGAAGGCCGGAGCCACTCCGACTATGGCAGTTTTGAACGAACGGACGTTGGAAGGTGA 426 0.4859 MAPSPVDHNSESTSSENQRSIPTPFLTKTYQLVDDLTIDDVISWNEDGSTFIVWNPTEFARDFLSKYFKHNNFSSFVRKLNTYGFKKVVGILERVFLPRRETASVRNTTTEDFDTFDANVACSEGRSHSDYGSFERTDVGR 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01323 141 MobiDBLite consensus disorder prediction 1 21 - -
Accr8g01323 141 SMART hsfneu3 21 111 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr8g01323 141 PRINTS Heat shock factor (HSF) domain signature 76 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr8g01323 141 PRINTS Heat shock factor (HSF) domain signature 63 75 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr8g01323 141 PRINTS Heat shock factor (HSF) domain signature 25 48 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr8g01323 141 SUPERFAMILY "Winged helix" DNA-binding domain 24 93 IPR036390 -
Accr8g01323 141 Gene3D - 16 136 IPR036388 -
Accr8g01323 141 Pfam HSF-type DNA-binding 25 90 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr8g01323 141 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 13 89 IPR027725 -
Accr8g01323 141 FunFam Heat stress transcription factor B-4 17 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01323 Accr-Chr8 33006317 33006828 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01323 1 89 HSF AT5G62020 74.157 1.24e-40 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Accr8g01323 HSF_DNA-bind 6.3e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01323 K09419 - qsa:O6P43_005570 160.614