Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01322 ATGGCTAAAGGTTTGAAGAAAAGCACCTATGAAGTGTTGGGAATGTGTTGTAATTCAGAGGTTGCTCTGATTGAAAAGATTCTGAAGGGTCTTCATGGAGTTAAGGAGATTTCAGTCATGCTCCCGACCCGAACCGCCACCGTAATCCATGATCTTGATCTAATCTCCGAGTCACAAATCACTGATGCACTGAATATGGCAAGGCTTGAGGCTAGTTTGAAACCTGAAGGAGAGACTAAGCATGAAACGAAATGGCCAGCACCAAGTACTTTGGCTTGTGGCTTGTTACTTGCACTTTCTTTTTTGAAGTATGCTTATCAGCCTTTGGAATACTTTGCTATTGGTGCTGTTGTTATTGGCTCCCCTAGAATTCTATTAAGAGGCATAGCTTCGATCAGGAATCTCTCTCTTGATATCAACATTCTAGTTCTATTGTCAGTGTTTGGTACTCTTGCTTTGGGGGATTTCTGGGAAGCTGGAATCATCACCTTCCTATTCTCCATTGCTCAATGGCTAGAGACAGTAGCCAGTTACAAGGCTATGGCCACCATGTCCTCTTTAACAAACATGGCTCCTCAAAGGGCCATTATTGCTGAGACAGGGGAACAAGTTGATGTCAATGAAGTTAAGATAAACACTGTCCTTGCAGTCAAGGCTGGTGATGCTATTCCTCTTGATGGTATTGTCGTCGAAGGGAAATGTGAAGTTGACGAAAAAATGTTGACAGGAGAGTCATTCCCTGTCTCCAAACAGTTAGGTTCAACTGTTTGGGCTGGCACTATTAATCTAAATGGTTATATCAGTGTGAAAACAACTGCATTGGCAATAGACACAGCAGTGGCAAGAATGGCAAAACTTGTTCAAGAGGCTCATAGCAGAAAATCCAGAGCCCAAAGATTCATAGATACCTGTGCGAAGTACTATGTACCAGGGGTTTTCTTGATTTCCGTTGGTGTTGCTGTGATTCCCATAGCATTAAGAGTTCCCAACATTAACTATTGGTCTCACATGGCTATTGTCGTTTTAGTAAGTGCATGCCCTTGTGCTCTTATCCTCTCCACACCAGTTACAATCTTCTGTTCCCTCACAAAAGCTGCCACAAGTGGGTTGCTTCTTAAAGGCGGAGATTATGTAGAAGCACTTGCTGGGCTTAAGATTCTGGCTTTTGATAAGACAGGCACATTGACAAAAGGGGAGTTCACTGTCACAGATTTTTCTACTGTTGGAGATGATATTAACATTCAACTGTTACTTTACTGGGTTACTAGTATTGAGAGTAAATCAAGTCACCCTATGGCAGCTGCACTTTTGGAATATGGAAGGATACAAGGTATCAAACCAATCCTTGAAAATGTGGAGGATTTTCAGAATTTTCCAGGGGAAGGAGTTTCCGGAAAAATCGATGGGAGAGAAATCTACATTGGCAACAGGAAAATATGTGTGAGAGCTGGCTGTGAAAGTGAGTTTCTAACCAAGGAAGAAAGAAATGGTTATATATGCTGTGGACCAACACTAGTTGGAATGTTCAGCCTATCAGATACATGCAGATCCGGAGCTTTAGAGGCAATTGAAGAGCTTAAGTCATTAGGCGTGAAATTGGCAATGCTGACAGGAGATAGCACTCATGCAGCTACACTTGTTCAGAATCAGCTGAATCATGCTCTAGACATAGTTCATGCTGAGCTTCTACCACATGAAAAGGCACTGATCATAGAGAATTTTAAGAAAGATGGGCTTACAGCCATGGTTGGAGACGGTATAAATGACGCCCCAGCATTAGCCACAGCTGATGTGGGCATCTCAATGGGAATCTCAGGTTCAGCTCTCGCAGTAGAGACAGGCCACGTCATTCTCATGTCAAACGACATCAGGAAGATACCTGAAGCCATCCATCTTGCAAGAACAACTTTCAGAAGGCTAGTTCAAAATGTCGTTTTCTCCATTGTCACAAAGGCTTTGGTCCTAGCTTTGGCTCTAGCAGGATACCCACTAATTTGGCTCGCCGTTTTAACTGATGTTGGAACCTGCTTGCTTGTGATTCTCAACAGCATGTTACTTCTGAACGAGAAAAAACACAATAACAACAGCAGAAAAGTACTCAATAAACCCAAATATGGGTTGTTCATAGAGGATAATAATAAGAACGAGCCATTACTTGGAAGGCAAACTGATTGTGGTGAAGAATTCTGCAGCAATGTCTCTTGTGAAGTGACCATTCCTAGTACTGCAACAACTGAATGCAAAAAAGCCTGTTCGAATTCTGCGCTTTTGAATCTGAGCTCGCTGGAGGAGTCTTCATGCAGAAAGAAGAGTACCTGTAACTCTGATTGTTGCAAGGTTCAGAACAGAGAAGTGAAGGTTAGTACAGAGAAGTGTGGGAATCAACAATGCTGCAAAGAATCCGGGAAGATAATCTCCGATGATCAAGTGAACATACCAGAAATTGTTATTGAGTGA 2457 0.4241 MAKGLKKSTYEVLGMCCNSEVALIEKILKGLHGVKEISVMLPTRTATVIHDLDLISESQITDALNMARLEASLKPEGETKHETKWPAPSTLACGLLLALSFLKYAYQPLEYFAIGAVVIGSPRILLRGIASIRNLSLDINILVLLSVFGTLALGDFWEAGIITFLFSIAQWLETVASYKAMATMSSLTNMAPQRAIIAETGEQVDVNEVKINTVLAVKAGDAIPLDGIVVEGKCEVDEKMLTGESFPVSKQLGSTVWAGTINLNGYISVKTTALAIDTAVARMAKLVQEAHSRKSRAQRFIDTCAKYYVPGVFLISVGVAVIPIALRVPNINYWSHMAIVVLVSACPCALILSTPVTIFCSLTKAATSGLLLKGGDYVEALAGLKILAFDKTGTLTKGEFTVTDFSTVGDDINIQLLLYWVTSIESKSSHPMAAALLEYGRIQGIKPILENVEDFQNFPGEGVSGKIDGREIYIGNRKICVRAGCESEFLTKEERNGYICCGPTLVGMFSLSDTCRSGALEAIEELKSLGVKLAMLTGDSTHAATLVQNQLNHALDIVHAELLPHEKALIIENFKKDGLTAMVGDGINDAPALATADVGISMGISGSALAVETGHVILMSNDIRKIPEAIHLARTTFRRLVQNVVFSIVTKALVLALALAGYPLIWLAVLTDVGTCLLVILNSMLLLNEKKHNNNSRKVLNKPKYGLFIEDNNKNEPLLGRQTDCGEEFCSNVSCEVTIPSTATTECKKACSNSALLNLSSLEESSCRKKSTCNSDCCKVQNREVKVSTEKCGNQQCCKESGKIISDDQVNIPEIVIE 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01322 818 CDD P-type_ATPase_HM 89 685 - -
Accr8g01322 818 SFLD p-type atpase 371 635 IPR044492 -
Accr8g01322 818 NCBIfam HAD-IC family P-type ATPase 162 666 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Accr8g01322 818 CDD HMA 9 72 IPR006121 GO:0046872
Accr8g01322 818 SFLD Haloacid Dehalogenase 371 635 - -
Accr8g01322 818 Gene3D - 399 515 IPR023299 GO:0000166
Accr8g01322 818 ProSiteProfiles Heavy-metal-associated domain profile. 6 72 IPR006121 GO:0046872
Accr8g01322 818 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 3 690 - -
Accr8g01322 818 Gene3D - 379 634 IPR023214 -
Accr8g01322 818 Gene3D - 2 74 - -
Accr8g01322 818 FunFam Copper-transporting ATPase 1, putative 177 291 - -
Accr8g01322 818 PRINTS P-type cation-transporting ATPase superfamily signature 529 539 - -
Accr8g01322 818 PRINTS P-type cation-transporting ATPase superfamily signature 388 402 - -
Accr8g01322 818 PRINTS P-type cation-transporting ATPase superfamily signature 507 518 - -
Accr8g01322 818 PRINTS P-type cation-transporting ATPase superfamily signature 583 602 - -
Accr8g01322 818 PRINTS P-type cation-transporting ATPase superfamily signature 607 619 - -
Accr8g01322 818 PRINTS P-type cation-transporting ATPase superfamily signature 237 251 - -
Accr8g01322 818 SUPERFAMILY Calcium ATPase, transduction domain A 201 287 IPR008250 -
Accr8g01322 818 ProSitePatterns E1-E2 ATPases phosphorylation site. 390 396 IPR018303 -
Accr8g01322 818 NCBIfam cadmium family heavy metal-translocating P-type ATPase 139 687 - -
Accr8g01322 818 NCBIfam heavy metal translocating P-type ATPase 139 686 IPR027256 GO:0006812|GO:0016020|GO:0019829
Accr8g01322 818 PRINTS H+-transporting ATPase (proton pump) signature 615 640 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Accr8g01322 818 PRINTS H+-transporting ATPase (proton pump) signature 583 599 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Accr8g01322 818 Pfam E1-E2 ATPase 198 366 - -
Accr8g01322 818 FunFam Putative cadmium/zinc-transporting ATPase 3 2 74 - -
Accr8g01322 818 Gene3D - 176 291 - -
Accr8g01322 818 SUPERFAMILY Calcium ATPase, transmembrane domain M 140 673 IPR023298 -
Accr8g01322 818 SUPERFAMILY HAD-like 387 684 IPR036412 -
Accr8g01322 818 Pfam Heavy-metal-associated domain 10 59 IPR006121 GO:0046872
Accr8g01322 818 FunFam Putative cadmium/zinc-transporting ATPase 3 399 515 - -
Accr8g01322 818 Pfam haloacid dehalogenase-like hydrolase 385 597 - -
Accr8g01322 818 SUPERFAMILY HMA, heavy metal-associated domain 3 75 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01322 Accr-Chr8 32977734 32983419 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01322 2 695 Primary Pumps ATPases AT4G30110 60.143 0.0 871
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01322 K01534 - gmx:100815324 1018.07