Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01319 ATGAATTATATTAGGAGCTACAGCTTCAAGCGTCTCTTCTCCTTCAAACGACGCAGTTTTGGGAAAGAATTTTTGACCCCTGAAGACAAAGAAACTCCTGAAAGACCTACTTGGAAATGCTTCTCATATCAAGAACTATTTGAAGCCACCAATGGCTTCTGCTCTGAGAACCTGGTTGGAAAAGGAGGGTATGCAGAGGTTTATAAGGGGAAATTAGAAGATAATGAGGAAATTGCAGTGAAGAGGCTCACAAAAAGCTGTAATGATGAGAGGAAAGAGAAGGAATTTCTGACAGAGATTGGAACAATTGGCCATGTTTGTCATCCAAATGTTTTACCTCTTCTTGGTTGCTGTATTGACAATGGGCTTTACCTTGTCTTTGAGTTTTCCTCTAGAGGCTCTGTTGCTTCCCTTCTTCATGATGAGAATGAGCCTGTAATGGAATGGAAAATAAGGCATAAGATTGCTCTTGGGACAGCACGTGGCCTCCATTACTTGCACAAAGGTTGCCAAAGAAGGATAATTCACAGAGATATAAAGGCCTCCAATGTTCTTTTGACTTCAGATTTTGAACCACAGATATCTGATTTTGGACTGGCCAAATGGCTTCCTTCTCAGTGGACTCATCATTCCATTGCCCCAATAGAAGGCACATTTGGGCATTTGGCTCCTGAGTATTACCTGCATGGAATAGTGGATGAGAAAACTGATGTATTTGCATTTGGGGTGTTTCTGCTAGAACTCATCTCTGGGAAGAAACCTGTGGATGGATCAAACCAGAGTTTACACAACTGGGCTAGGCCAATATTGAAGGGAGGAGAGCTAGAGAAAGTGGTAGATCCAAGCCTTGAAGGAGCTTATGATGTTTCAGAGTTAACAAGGCTTGCTTTTGCTGCTTCTTTGTGTATCCGATCATCTTCCACTTGGAGACCCACCATGACTCAGGTATTAGAGGTAATGGAGGAGGGAGAAATAGATAAAGATAAATGGAAGATGGAAGAAGACGAGGAGGAAGAAGAGGATGTGATATGGGGTTTTGAGGATTTGGAATATGAATATGAATATGATAGTTTGTCCTCAACGTCTCTCCCTGACTCCGTTACAAGTAATTAG 1113 0.4187 MNYIRSYSFKRLFSFKRRSFGKEFLTPEDKETPERPTWKCFSYQELFEATNGFCSENLVGKGGYAEVYKGKLEDNEEIAVKRLTKSCNDERKEKEFLTEIGTIGHVCHPNVLPLLGCCIDNGLYLVFEFSSRGSVASLLHDENEPVMEWKIRHKIALGTARGLHYLHKGCQRRIIHRDIKASNVLLTSDFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYYLHGIVDEKTDVFAFGVFLLELISGKKPVDGSNQSLHNWARPILKGGELEKVVDPSLEGAYDVSELTRLAFAASLCIRSSSTWRPTMTQVLEVMEEGEIDKDKWKMEEDEEEEEDVIWGFEDLEYEYEYDSLSSTSLPDSVTSN 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01319 370 Coils Coil 320 340 - -
Accr8g01319 370 ProSiteProfiles Protein kinase domain profile. 53 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01319 370 ProSitePatterns Protein kinases ATP-binding region signature. 59 81 IPR017441 GO:0005524
Accr8g01319 370 SUPERFAMILY Protein kinase-like (PK-like) 34 320 IPR011009 -
Accr8g01319 370 ProSitePatterns Serine/Threonine protein kinases active-site signature. 174 186 IPR008271 GO:0004672|GO:0006468
Accr8g01319 370 Gene3D Transferase(Phosphotransferase) domain 1 131 347 - -
Accr8g01319 370 FunFam Putative receptor-like serine/threonine-protein kinase 21 129 - -
Accr8g01319 370 SMART serkin_6 53 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01319 370 FunFam Putative receptor-like serine/threonine-protein kinase 131 344 - -
Accr8g01319 370 CDD STKc_IRAK 59 322 - -
Accr8g01319 370 Pfam Protein kinase domain 56 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01319 370 Gene3D Phosphorylase Kinase; domain 1 25 129 - -
Accr8g01319 370 PANTHER OS08G0249100 PROTEIN 26 348 IPR046958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01319 Accr-Chr8 32920685 32924335 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01319 39 335 Receptor kinase-like Gene Family AT1G60800 42.951 6.32e-74 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Accr8g01319 Pkinase 3.7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01319 - - ahf:112697971 551.977