Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01318 ATGGACTCTTCTCCCCACAACTGGCTCGCTTTCTCTCTCTTCCCTCCTTCTTTCTCTTCCCCTACCCCAGCCCCAGGGAGCACCGTCGATGCCCCGCCGGATGCGGCTGTCGGAGGTGGCGGTGCAACCAACAACCACCTCTCCGTCTTCGCCGGAGCCGCCCCCAAGTTCGAGGACTTCCTGGGCGGCGCCTTCTCCTCCGCTACGTCGGTCACAGCTGCAGTACCCACGGCGCCTCACTTCTCCACCGACAACGTCTTCGGTTCTGAGCTCAAAACCATAGCCGCTGCCTTCCTCCCCGGCTTGGCCGCAGCTGAGCAATCGCAGCCGCAAAAGCAATCGCTGGCTCTGGCCGTGCCGTCTTCTAAGAAAACCGCGGACACCTTCGGCCAACGCACCTCCATCTACCGCGGCGTCACTCGGCATAGATGGACGGGGAGATATGAAGCTCATCTATGGGATAATAGTTGCAGAAGAGAAGGCCAAAGTAGGAAAGGAAGGCAAGTCTATTTGGGTGGCTATGATAAGGAAGAGAAAGCAGCCAGAGCTTATGATCTTGCTGCTCTCAAATATTGGGGTTCAACCACCACCACCAACTTCCCAATTTCCAACTATGAGAAGGAACTGGAACAGATGAAGAACATGACAAGGCAAGAATTTGTTGCTTCACTACGAAGGAAGAGTAGTGGTTTCTCCAGAGGGGCCTCAATCTACAGAGGAGTGACGAGGCACCACCAACATGGGCGATGGCAAGCAAGAATCGGCAGAGTTGCCGGAAATAAAGACCTTTATCTCGGCACTTTTAGTACTCAAGAAGAAGCTGCTGAAGCATATGATATAGCAGCCATAAAATTTAGAGGACTTAGTGCGGTGACTAACTTCGACATGACCCGATACGATGTCAAGAGCATAGCCAACAGCAATCTTCCAATAGGAGGATTCTCATCCTCCAAAGCAAGAAACTCATCAGATTCTTCTGCAGCATCAGACAACAGCAAAAGCAACGAGGGAAACCGATCAACAACCGATAACAACAACATCATCATTGACAGAGATCAATCATCTTCATCGGCCTCCAACCTCAGCTTCGCCATACCCATCATCAAACAAGACCCAACCACCATAGATTACTGGTCCAATATCTTCGGTTACCAAAACCACTACAAAAACACTACCACTCCCAACAATGTTACAATTGCCTCTCCTTTACAGAACTACAATAATGGCTCATTCGGCTTGGAGTTGCAGAGAGACAACAACGCATTTATGGATGGGGGTGTGATCGTTCAGAACATTCAGCAGCAGCAGCAACAAAGTGGAAGCAATAATAACAACAATAGTACTGGGACTGGGGATTCAAGTTCAAGTTCAGGGATTCCATTGGCCACACCAATAGGTATAAGTAGTACGAGTAGTTATGAGGATTCTTCTGGATATGGAAACTGGAGTATAGGGCCTGGTGGTCTGCACACTTTCCAAACACACTCAAAAGGAAGTCTCTTTCAAACGCCAATATTTGGGATTGAATGA 1530 0.4948 MDSSPHNWLAFSLFPPSFSSPTPAPGSTVDAPPDAAVGGGGATNNHLSVFAGAAPKFEDFLGGAFSSATSVTAAVPTAPHFSTDNVFGSELKTIAAAFLPGLAAAEQSQPQKQSLALAVPSSKKTADTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDLAALKYWGSTTTTNFPISNYEKELEQMKNMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLSAVTNFDMTRYDVKSIANSNLPIGGFSSSKARNSSDSSAASDNSKSNEGNRSTTDNNNIIIDRDQSSSSASNLSFAIPIIKQDPTTIDYWSNIFGYQNHYKNTTTPNNVTIASPLQNYNNGSFGLELQRDNNAFMDGGVIVQNIQQQQQQSGSNNNNNSTGTGDSSSSSGIPLATPIGISSTSSYEDSSGYGNWSIGPGGLHTFQTHSKGSLFQTPIFGIE 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01318 509 PRINTS Ethylene responsive element binding protein signature 277 297 IPR001471 GO:0003700|GO:0006355
Accr8g01318 509 PRINTS Ethylene responsive element binding protein signature 136 147 IPR001471 GO:0003700|GO:0006355
Accr8g01318 509 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 97 417 - -
Accr8g01318 509 Gene3D AP2/ERF domain 135 203 IPR036955 GO:0003700|GO:0006355
Accr8g01318 509 Gene3D AP2/ERF domain 237 297 IPR036955 GO:0003700|GO:0006355
Accr8g01318 509 SUPERFAMILY DNA-binding domain 236 296 IPR016177 GO:0003677
Accr8g01318 509 SMART rav1_2 135 207 IPR001471 GO:0003700|GO:0006355
Accr8g01318 509 SMART rav1_2 237 301 IPR001471 GO:0003700|GO:0006355
Accr8g01318 509 ProSiteProfiles AP2/ERF domain profile. 237 295 IPR001471 GO:0003700|GO:0006355
Accr8g01318 509 FunFam AP2-like ethylene-responsive transcription factor 236 297 - -
Accr8g01318 509 CDD AP2 134 203 IPR001471 GO:0003700|GO:0006355
Accr8g01318 509 MobiDBLite consensus disorder prediction 434 461 - -
Accr8g01318 509 MobiDBLite consensus disorder prediction 315 347 - -
Accr8g01318 509 ProSiteProfiles AP2/ERF domain profile. 135 201 IPR001471 GO:0003700|GO:0006355
Accr8g01318 509 Pfam AP2 domain 135 193 IPR001471 GO:0003700|GO:0006355
Accr8g01318 509 Pfam AP2 domain 237 287 IPR001471 GO:0003700|GO:0006355
Accr8g01318 509 SUPERFAMILY DNA-binding domain 134 203 IPR016177 GO:0003677
Accr8g01318 509 CDD AP2 236 295 IPR001471 GO:0003700|GO:0006355
Accr8g01318 509 FunFam AP2-like ethylene-responsive transcription factor ANT 134 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01318 Accr-Chr8 32897063 32900079 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01318 82 509 AP2-EREBP Transcription Factor Family AT5G57390 55.455 8.90e-146 424
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Accr8g01318 AP2 6.8e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01318 K09285 - gmx:100797828 523.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g01318 8 32897063 32900079 Accr8g01318 8 32897063 32900079 ECH