Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01303 ATGAGAGACTTATGGACCTCTTTGGCGTCGATTCTGGGCGTTTTTGCTTTCTGTCAGACTCTTCTCCAGACGGTTTTCCCTCCGGAACTCCGCTTCGCCACCGTCAAGTTCTTTAACCGCCTGTTCAATTGCTTCTCATCGTACTGCTACTTCGATATAACGGAAATCGACGGCGTTAATACCAACGAGCTCTACAACGCCGTCCAGCTCTACCTTAGCTCCTCCGTCTCCATCACCGGAAACCGCCTTAGCCTCACCCGTGCTCTCAACTCCAGCGGCTTCACCTTCGGCCTCGCCAACAATGACAGCATCGTCGACACCTTCAACGGCGTCAATGTGCTGTGGGAACACGTGGTCACGCAAAGGCAGGCCCAGAACTTCTCGTGGCGGCCGCTGCCGGACGAGAAGCGAGGGTTCACGCTCCGAATCATGAAGAAAGATAAATCTCTGATTCTCTATTCCTACTTGGATTACATTATGGAGAAAGCGAATGAGATTAGGAGGAAGAATCAGGAACGTTTATTGTACACGAATTCAAGAGGCGGTTCCTTGGACTCTAGGGGCCACCCTTGGGAATCGGTGCCGTTCAAGCATCCTAGCACGTTCGATACTTTAGCGATGGACCCTGAGAGGAAGAAGGAGATCATGGAAGATCTGCAAGATTTCGCGAACGGTCAATCGTTCTACCAGAAAACGGGTCGGGCTTGGAAGAGAGGTTACCTTCTTTACGGGCCACCCGGAACCGGAAAATCTAGTATGATCGCCGCAATGGCGAATCATCTCGGCTATGATATATACGACTTGGAATTGACCGAGGTTCATAACAATTCAGAGTTGAGGAAGCTTCTGATGAAGACGAGTTCTAAATCCATCATTGTGATCGAAGACATTGATTGCTCGATCAACTTGACCAACAGGAAGAAGAACAGTAACAATACTAGTTCCAGGAACTACTACGATCCTGCCGCTGAGTTACGAGGTGCTTGTGGCGGCTCTGGTTGTGGTGAAGAGGGTGGGAATTCAATAACGCTTTCTGGATTGTTGAATTTTACTGATGGGTTATGGTCTTGTTGTGGGAGCGAGAGGATTTTCGTGTTCACAACCAACCACATTGAGAAGCTGGACCCTGCTCTGTTACGAAGTGGGAGAATGGATATGCACATTTTCATGAACTACTGTTCATTCTCGGCTCTGAAGATTCTTTTGAGGAACTATCTGGGATATGAAGAAGGTGATTTGGAGGTGTCAGTGATGAAGGAATTGGAGCAAGTTATCGACAAGGCACGGATGACTCCGGCGGATATCAGCGAGGTTCTGATCAAGAGCCGGCGGTTCAAGGAGAAAGCAGTGAAGGAGTTGTTGGAGACACTGAAACTGGCAGCAGAAAGGAACCCAAAAAATGGGCTTCTGAGAAGAACAAATGGGGAGGTGGATGACGAAGAAGAAGAGCAAGAGAAAAGAGCTCTGGAGAGTCCTAAAGAAGAGTCAGAGATAGAGGACAGTTGCAGCAAGGGAGATGAAGAAGGAGAAGAGGAAGAAGAAGAGAAGATCAAATGA 1557 0.4849 MRDLWTSLASILGVFAFCQTLLQTVFPPELRFATVKFFNRLFNCFSSYCYFDITEIDGVNTNELYNAVQLYLSSSVSITGNRLSLTRALNSSGFTFGLANNDSIVDTFNGVNVLWEHVVTQRQAQNFSWRPLPDEKRGFTLRIMKKDKSLILYSYLDYIMEKANEIRRKNQERLLYTNSRGGSLDSRGHPWESVPFKHPSTFDTLAMDPERKKEIMEDLQDFANGQSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANHLGYDIYDLELTEVHNNSELRKLLMKTSSKSIIVIEDIDCSINLTNRKKNSNNTSSRNYYDPAAELRGACGGSGCGEEGGNSITLSGLLNFTDGLWSCCGSERIFVFTTNHIEKLDPALLRSGRMDMHIFMNYCSFSALKILLRNYLGYEEGDLEVSVMKELEQVIDKARMTPADISEVLIKSRRFKEKAVKELLETLKLAAERNPKNGLLRRTNGEVDDEEEEQEKRALESPKEESEIEDSCSKGDEEGEEEEEEKIK 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01303 518 MobiDBLite consensus disorder prediction 486 500 - -
Accr8g01303 518 MobiDBLite consensus disorder prediction 501 518 - -
Accr8g01303 518 MobiDBLite consensus disorder prediction 468 518 - -
Accr8g01303 518 SMART AAA_5 236 394 IPR003593 GO:0016887
Accr8g01303 518 Pfam ATPase family associated with various cellular activities (AAA) 241 391 IPR003959 GO:0005524|GO:0016887
Accr8g01303 518 PANTHER BCS1 AAA-TYPE ATPASE 7 462 - -
Accr8g01303 518 CDD RecA-like_BCS1 215 390 - -
Accr8g01303 518 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 143 456 IPR027417 -
Accr8g01303 518 Gene3D - 192 388 IPR027417 -
Accr8g01303 518 Gene3D - 389 477 - -
Accr8g01303 518 Pfam Domain associated at C-terminal with AAA 26 118 IPR025753 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01303 Accr-Chr8 32703478 32705034 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01303 210 459 Calmodulin-binding Proteins AT3G56690 23.256 4.67e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01303 - - pcin:129307972 879.782
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g01303 8 32703478 32705034 Accr8g01303 8 32703478 32705034 ECH