Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01300 ATGGAAACTCAAAATCATGATGAATACATTTTCTGTTCCAAGTTGCCTGACATTTACATTCCATCTCACCTTCCACTGCATACTTACTGCTTCCAGAACTTGTCCCAATTCAAACACCGTCCCTGCCTTATTGACAGCGGCACCGGCGAGACTTTCACGTACGCAGATGTTGAACTCACCGCCCGGAGAGTCGCTGCCGGCCTCAACAACCTCGGCATCCAACAAGGCCACGTCATCATGCTCCTCCTTCAGAACTGTCCCCAGTTCGTCTTCGCCTTCCTCGGCGCCTCCTACCGCGGCGCCACCGTCACGACGGCCAACCCGTTCTACACCCCGGCGGAGGTCGCCAAGCAAGCAAAAGCTTCCAAAGCCAAGCTCATCATAACACAATCCTCCTTCGTCGACAAGGTTAAGGATCTAGAGGCAAACAATGGCATCAAACTGATGTGTATCGACGAGACGACTGATTTTCTGGGTTTCTCAGATTTAACGAAGGCCGACGAAGGGGGAATCCCGCCGGTGGAGATATCCCCGGATGACGTCGTTGCGCTGCCTTATTCATCAGGCACCACAGGGCTTCCCAAAGGGGTTATGCTCACACACAAGAGCCTAGTTACGAGTGTGGCTCAGCAAGTTGATGGAGAGAACCCTAATCTGTATTTTCACTACGACGATGTGATTGTGTGCGTTTTGCCTCTGTTTCACATTTATGGGTTGAACTCTGTGTTGTTGTGTGGGCTTCGAGTTGGTGCTGCGATTTTGATCGTACAGAAGTTTGAGATCGGAAATTTGCTTGATCTGATACAGAAACACCAAGTGAGTATTGCGCCGTTTGTGCCACCCATAGTGTTGGCCATTGCCAAAAGCCCAAACCTGGATCGATACGACCTGTCGTCGATAAGAATGATCTTGTCTGGTGCGGCTCCTCTGGGAAAAGAGCTCGAAGATGCTGTGAAGGCTAAGCTTTCCCAAGCCAAACTCGGACAGGGATATGGAATGACGGAGGCAGGGCCAGTTCTGTCAATGAGCTTAGCATTTGCCAAAGAGCCGTTTGGGGTAAAATCAGGTGCCTGTGGGACCGTCGTAAGAAATGCCGAGATGAAGATCGTTGACCCTATCTCCGGCGCCTCCCTTTGCCGGAATCAAGCCGGTGAGATTTGCATTAGAGGACACCAGATCATGAAAGGTTACATAAACGACATAGAGGCAACGAAGAGAACAATAGACGAGAGAGGGTGGCTACACACAGGCGATATTGGATACATAGACGATGATGATGAACTCTTCATCGTGGATCGCCTCAAGGAACTCATCAAATACAAAGGCTTTCAAGTTGCTCCTGCTGAACTTGAGGCTCTCCTCATTTCTCATCCTTCCATTTCTGATGCCGCTGTTGTTCCGATGAAAGATGAAGATGCAGGAGAAGTTCCCGTGGCTTTTGTTGTAACATCAAACGGTTCTAAGCTCTCTGAAGATGAAATCAAGCATTACATCTCCAAACAGGTTGTATTTTACAAGAGAATCAAAAGGGTTATTTTCGTAAACTCAATTCCAAAGGCACCCTCTGGCAAGATATTGCGTAAAGACCTAAGAGCAAAGCTCATACCAAATTAG 1614 0.4864 METQNHDEYIFCSKLPDIYIPSHLPLHTYCFQNLSQFKHRPCLIDSGTGETFTYADVELTARRVAAGLNNLGIQQGHVIMLLLQNCPQFVFAFLGASYRGATVTTANPFYTPAEVAKQAKASKAKLIITQSSFVDKVKDLEANNGIKLMCIDETTDFLGFSDLTKADEGGIPPVEISPDDVVALPYSSGTTGLPKGVMLTHKSLVTSVAQQVDGENPNLYFHYDDVIVCVLPLFHIYGLNSVLLCGLRVGAAILIVQKFEIGNLLDLIQKHQVSIAPFVPPIVLAIAKSPNLDRYDLSSIRMILSGAAPLGKELEDAVKAKLSQAKLGQGYGMTEAGPVLSMSLAFAKEPFGVKSGACGTVVRNAEMKIVDPISGASLCRNQAGEICIRGHQIMKGYINDIEATKRTIDERGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLISHPSISDAAVVPMKDEDAGEVPVAFVVTSNGSKLSEDEIKHYISKQVVFYKRIKRVIFVNSIPKAPSGKILRKDLRAKLIPN 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01300 537 Gene3D - 435 535 IPR045851 -
Accr8g01300 537 SUPERFAMILY Acetyl-CoA synthetase-like 9 534 - -
Accr8g01300 537 ProSitePatterns Putative AMP-binding domain signature. 184 195 IPR020845 -
Accr8g01300 537 FunFam 4-coumarate--CoA ligase 2 436 536 - -
Accr8g01300 537 FunFam Long-chain-fatty-acid--CoA ligase FadD 12 435 - -
Accr8g01300 537 Pfam AMP-binding enzyme 33 440 IPR000873 -
Accr8g01300 537 Gene3D - 2 434 IPR042099 -
Accr8g01300 537 Pfam AMP-binding enzyme C-terminal domain 449 524 IPR025110 -
Accr8g01300 537 CDD 4CL 20 530 - -
Accr8g01300 537 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 6 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01300 Accr-Chr8 32668799 32676569 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01300 1 502 Monolignol Biosynthesis Gene Families AT1G51680 70.039 0.0 713
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01300 K01904 - qsa:O6P43_022302 859.751