Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01299 ATGGAAACTCCTCCGACCGAATTCATCTTCCGATCCAAACTCCCCGACATTTCCATCTCAACCCACCTTCCACTTCACTCCTATGTCTTCGAGAATCTATCTCAGGTCAAAGACCGACCCTGCCTCATCAACGGCGACACTGGCGAGACCTTTACCTATGCCAACGTCGACCTCACCGCCCGCCGTGTCGCAGCCGGCCTCGCCAAACTCGGCATCAGACAAGGTGACGTCATCATGCTGGTGCTCCGGAACTGCCCCGAATTCGCTCTGGCCTTCCTTGGAGCCTCCTTCGCCGGCGCCGCCGTGACCACCGCGAACCCCTTATTCACTCCGGCTGAGCTGGCAAAACAAGCCGCCGCGTCCAAGTCGAAGTTCATCATAACCCAAACTGCTTTCGTTGAGAAAATCAAGGATTTTGCACATACCCATGGCGTTTCACTGATGTGCATTGATTCAAATTTTCCAGAAAAAGAAGGCATCTCAAATTTTTCTCTACTCACCCAATCCGACGAAGCTGATATGCCGGCCGTCAAGATCAGCCCCAACGACATTGTGGCCCTGCCGTATTCCTCAGGCACCTCCGGCGTCCCAAAGGGCGTGATGTTGACCCACAAGAATCTGGTAACCACTGTGGCTCAGCTCGTCGACGGCGAAAACCCGAACCAGTACACCAGCAGCGACGACGTGCATATCTGCGTGCTTCCAATGTTCCATATCTATGCGCTTAACTCTATTTTGCTCTGTTCTATTCGTGCCGGAGCAGCCATTCTTACCGTGAGCAAGTATGACATCACCACATTGTTGAAGATGATCGAGACTTACAAGGTGACGATGGCTTCTTTCGTGCCTCCGATTCTGTTGAGCATCGTGAAGAGCGAGGAAGTTGATCGGTACGACCTTTCGTCCATTAGAGTGATCGTCACCGGAGCGGCGCCGGTGAGCGTTGAGTTGGAACGAGCTTTGAAGGCCAAGCTTCCACATGCCATACTTGGACAGGGATATGGCATGACGGAGGGTGGCCCTCTGGCGATAAGTCTGTCGTTTGCGAAGGAACCGGTGGAGGTGAAATCAGGTGCGTGCGGGACAGTGATAAGAAACGCTGAGATGAAGATCGTGGACATTGACACGGGAGCTTCGCTTCCCAGAAACAGAGCTGGTGAGATCTGCATCAGAGGCGATCAAGTCATGAAAGGGTACCTAAACGACCCGGAGGCGACAAAAACGACGATAGACGAAGAAGGGTGGCTTCACACGGGGGACATCGGATACGTAGACGACGACGCTCAAGTGTTCGTTGTGGATCGTTTGAAGGAGATCATCAAATACAAAGGCTTCCAGGTGGCTCCTGCTGAGCTGGAGGCTCTACTTATCTCTCACCCTCTCATCTCTGAAGCTGCTGTTGTTCCGATGAAAGATGAGGGTGCGGGAGAGCTTCCAGTGGCATTTGTGGTTAGATCCAACGGTTCTACGATCTCTGAGGATGGCATTAAACACTTCGTTTCACAACAGGTGGTGTATTACAAGAGAATTCATAAGGTTATTTTCACAGACACTATTCCGAAAGCAGCCTCTGGGAAAATTTTACGAAAGGATTTAAAAGCAAGGCTTGCATCAGATTTGGGCAATTAA 1629 0.5157 METPPTEFIFRSKLPDISISTHLPLHSYVFENLSQVKDRPCLINGDTGETFTYANVDLTARRVAAGLAKLGIRQGDVIMLVLRNCPEFALAFLGASFAGAAVTTANPLFTPAELAKQAAASKSKFIITQTAFVEKIKDFAHTHGVSLMCIDSNFPEKEGISNFSLLTQSDEADMPAVKISPNDIVALPYSSGTSGVPKGVMLTHKNLVTTVAQLVDGENPNQYTSSDDVHICVLPMFHIYALNSILLCSIRAGAAILTVSKYDITTLLKMIETYKVTMASFVPPILLSIVKSEEVDRYDLSSIRVIVTGAAPVSVELERALKAKLPHAILGQGYGMTEGGPLAISLSFAKEPVEVKSGACGTVIRNAEMKIVDIDTGASLPRNRAGEICIRGDQVMKGYLNDPEATKTTIDEEGWLHTGDIGYVDDDAQVFVVDRLKEIIKYKGFQVAPAELEALLISHPLISEAAVVPMKDEGAGELPVAFVVRSNGSTISEDGIKHFVSQQVVYYKRIHKVIFTDTIPKAASGKILRKDLKARLASDLGN 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01299 542 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 7 534 - -
Accr8g01299 542 Pfam AMP-binding enzyme 31 442 IPR000873 -
Accr8g01299 542 Pfam AMP-binding enzyme C-terminal domain 451 526 IPR025110 -
Accr8g01299 542 SUPERFAMILY Acetyl-CoA synthetase-like 12 538 - -
Accr8g01299 542 Gene3D - 437 539 IPR045851 -
Accr8g01299 542 CDD 4CL 19 532 - -
Accr8g01299 542 ProSitePatterns Putative AMP-binding domain signature. 187 198 IPR020845 -
Accr8g01299 542 FunFam 4-coumarate--CoA ligase 2 438 539 - -
Accr8g01299 542 Gene3D - 2 436 IPR042099 -
Accr8g01299 542 FunFam Long-chain-fatty-acid--CoA ligase FadD 11 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01299 Accr-Chr8 32645781 32652856 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01299 6 504 Monolignol Biosynthesis Gene Families AT1G51680 64.554 0.0 650
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01299 K01904 - gmx:100810418 784.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g01299 8 32645781 32652856 Accr8g01299 8 32645781 32652856 ECH