Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01294 ATGGGGAGAGCTCCATGCTGTGACAAGGCTAACGTCAAGAAAGGACCTTGGTCCCCCGAAGAAGATGCTAAACTCAAAGCCTATATCGAAAAGTATGGGACTGGAGGCAACTGGATTGCTCTTCCTCAAAAAATTGGGCTCAAGAGATGTGGAAAGAGTTGCAGACTGAGATGGCTAAATTATCTGAGGCCTAATATCAAGCATGGTGGGTTTACTGAAGAAGAAGACAACATCATCTGTAGCCTTTACATTAGCATCGGAAGCAGGTGGTCCATAATCGCAGCACAGCTACCAGGAAGGACAGACAATGACATAAAAAACTACTGGAACACAAGATTGAAGAAGAAGTTACTGGGAAGAAGAAAACAATCCTCTTCTGGTTTCAATAATAATAATCCACGAAACGGGTCAGGGAACGATCCAGACGATTCCAATGCCCTAAGCAACTCGGCTCTTGAAAGGCTTCAACTTCATATGCAACTTCAGGGCCTCCAAAACCAAAACCCTTTCTCTAATCTCTACAACAACCCTGCACTACTCTGGCCCACCAATAAGTTCCAGACTCTGATTATGAGTGGTAATAGTAATAATAATAAAAACCCTGATGATCAGTCTCAAAAAGATCAACAATTCTACAAACCAACTGGTCTATCTAATACCTCTCTTCATCATCAACAAGAACGTGAGAAGATCCATGGTTCTTCTTCACAGGTTGACATGCCTTCTTCTGTTCCTCTCGTGACGGCAGCGATTGATCCAATGGATTCTAATAATGTGGAGAATGATCAGCAAGTTTCTGATGCACTTCAAGCTGAGTTGAATGAGATTCTCAGAAATAATAACAGATCGATGATGAGTTACAATCATCATCATCAAGATCAGATTCAGATGTCTGATTTTTGTTGTTTTGCAGAAATGAATTTGAGTGATTCCAATAAGGACAGCTTGATGAATATGTGGTGGTCCAATGATTTAATGGCGAAATCAGCATCTTCCAGCTCTTGGGGTTCAAGAACAATAAGCACAAGTACAGCTCCTGTTCTTCAGCCAGAAGAAGGGATGTTTCAAGATAATTATGAACTCGTCGCCGGTTACAGTTTGTAG 1104 0.4149 MGRAPCCDKANVKKGPWSPEEDAKLKAYIEKYGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFTEEEDNIICSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLGRRKQSSSGFNNNNPRNGSGNDPDDSNALSNSALERLQLHMQLQGLQNQNPFSNLYNNPALLWPTNKFQTLIMSGNSNNNKNPDDQSQKDQQFYKPTGLSNTSLHHQQEREKIHGSSSQVDMPSSVPLVTAAIDPMDSNNVENDQQVSDALQAELNEILRNNNRSMMSYNHHHQDQIQMSDFCCFAEMNLSDSNKDSLMNMWWSNDLMAKSASSSSWGSRTISTSTAPVLQPEEGMFQDNYELVAGYSL 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01294 367 Gene3D - 7 68 - -
Accr8g01294 367 CDD SANT 71 113 IPR001005 -
Accr8g01294 367 SMART sant 67 115 IPR001005 -
Accr8g01294 367 SMART sant 13 64 IPR001005 -
Accr8g01294 367 Coils Coil 259 279 - -
Accr8g01294 367 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Accr8g01294 367 FunFam Transcription factor RAX3 7 68 - -
Accr8g01294 367 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Accr8g01294 367 FunFam Transcription factor MYB36 70 137 - -
Accr8g01294 367 Gene3D - 70 138 - -
Accr8g01294 367 MobiDBLite consensus disorder prediction 122 147 - -
Accr8g01294 367 CDD SANT 16 62 IPR001005 -
Accr8g01294 367 MobiDBLite consensus disorder prediction 119 147 - -
Accr8g01294 367 MobiDBLite consensus disorder prediction 191 241 - -
Accr8g01294 367 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Accr8g01294 367 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Accr8g01294 367 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Accr8g01294 367 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Accr8g01294 367 PANTHER OS09G0431300 PROTEIN 1 298 - -
Accr8g01294 367 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Accr8g01294 367 MobiDBLite consensus disorder prediction 191 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01294 Accr-Chr8 32552809 32554118 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01294 1 238 MYB Transcription Factor Family AT5G57620 65.560 1.85e-100 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr8g01294 Myb_DNA-binding 4.2e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01294 K09422 - gmx:778083 353.599