Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01290 ATGGGATTTGCAGGCAGTGTTGGAAAATACAAACTTGGTCGGACGATTGGCGAAGGGACATTTGCTAAGGTTAAGCTTGCTGTTAACAGCATCAATGGTCAACATGTGGCAATCAAGATCCTTGATAAGAAAATGGTCATGGAGAGCCATCTCAAGTATCAGGTCCAAAGAGAGATAAGAACAATGAAGCTCCTGAACCATCCCAATATTGTAAAAATCCATGAGGTTCTTGGCACGAGGACGAAGATATATATTGTGATGGAGTATATATCAGGAGGACAATTATCAGACAAGCTGTCTTATGCCATAAAGTTGAATGAAACTGAAGCAAGGAAACTTTTCCAGCAACTTATTGATGCTGTAGATTACTGCCATAACAAAGGAGTTTACCATAGAGATCTTAAGCCAGCAAACTTGCTCCTCGACAGCAAAGGGAATCTGAAGCTGTCTGATTTCGGACTAAGCGCACTGAGAAAGCCTGATAATGTTCTAACAACTGCATGTGGTTCCCCAAGCTATGTGGCACCTGAGCTTCTATGGAACAAGGGCTACGATGGAGCAGCTGCTGATGTTTGGTCATGTGGGGTGATCCTTTTTGAATTACTTGCAGGACGTCTTCCTTTTGATGACCACAACTTGATGAACTTGTATAAGAAGATATGTAGAGCAGAGTACATGTGTCCACCATGGTTTACAGCAAGTCAAAGGAAACTAATTGCCAAAATACTCGAACCACGAGTTACAAAGAGAATATCTATGCCAGAGATCGTGGAAGATGAATGGTTTCAAACAGATTATGTTCCTGCTTGTGAATCTGAGTGTGATCAGAACAATCACATTGATGATGTTAATGCTGCTTTCGATTTAGTTGAGGAGAATATCTCAGAGGCAACAATCCCAAAGTCCTCAAGTTTCATTAATGCTTTCCAACTTATAGCCATGTCTGAAGACCTTGATCTATCAGGTCTTTTTGAAGAACGGGATCACAAGCAGAAAACAAGAATAGGATCCAAGCACAACATTGATGAAACCATAGAGAAAATAGAAACTGCAGCAACAGATGTGAAGCTGTCAATAGAAAAAAAGAACAACTTCACGTTAAAAATGCAACCCAAACGAACCATGACTAGATGTTCCAGATCATATTATGACCTATCAGCTAAGGTGATTGAAGTTGCTCCAGCTCATTGTGTTGTTGAAATATCAAAATCTGCAGGAGATTTAATAATCTACAATGAATTTTGTCAAAGTCTATCCAATCTACTGACAGAAAAATCTGTTGAATTATCGCAATCCCATGAGTCTATCGAAGAATACATCACAGAAAAGAATAACCAAGATGCTGGCCGCTCTGAAGAGTCGAACCAGGAAGATAATAAAGGCATTCATGATCATATATCTGCTTGA 1407 0.3973 MGFAGSVGKYKLGRTIGEGTFAKVKLAVNSINGQHVAIKILDKKMVMESHLKYQVQREIRTMKLLNHPNIVKIHEVLGTRTKIYIVMEYISGGQLSDKLSYAIKLNETEARKLFQQLIDAVDYCHNKGVYHRDLKPANLLLDSKGNLKLSDFGLSALRKPDNVLTTACGSPSYVAPELLWNKGYDGAAADVWSCGVILFELLAGRLPFDDHNLMNLYKKICRAEYMCPPWFTASQRKLIAKILEPRVTKRISMPEIVEDEWFQTDYVPACESECDQNNHIDDVNAAFDLVEENISEATIPKSSSFINAFQLIAMSEDLDLSGLFEERDHKQKTRIGSKHNIDETIEKIETAATDVKLSIEKKNNFTLKMQPKRTMTRCSRSYYDLSAKVIEVAPAHCVVEISKSAGDLIIYNEFCQSLSNLLTEKSVELSQSHESIEEYITEKNNQDAGRSEESNQEDNKGIHDHISA 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01290 468 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Accr8g01290 468 FunFam Non-specific serine/threonine protein kinase 301 427 - -
Accr8g01290 468 ProSiteProfiles Protein kinase domain profile. 10 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01290 468 CDD CIPK_C 307 419 - -
Accr8g01290 468 Gene3D Phosphorylase Kinase; domain 1 4 94 - -
Accr8g01290 468 MobiDBLite consensus disorder prediction 433 468 - -
Accr8g01290 468 SUPERFAMILY Protein kinase-like (PK-like) 8 303 IPR011009 -
Accr8g01290 468 Pfam Protein kinase domain 10 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01290 468 ProSiteProfiles NAF domain profile. 301 325 IPR018451 GO:0007165
Accr8g01290 468 FunFam Non-specific serine/threonine protein kinase 2 89 - -
Accr8g01290 468 FunFam Non-specific serine/threonine protein kinase 4 302 - -
Accr8g01290 468 ProSitePatterns Protein kinases ATP-binding region signature. 16 39 IPR017441 GO:0005524
Accr8g01290 468 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 8 411 - -
Accr8g01290 468 SMART serkin_6 10 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01290 468 Gene3D Transferase(Phosphotransferase) domain 1 95 288 - -
Accr8g01290 468 Gene3D Kinase associated domain 1, KA1 301 425 - -
Accr8g01290 468 Pfam NAF domain 304 361 IPR004041 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01290 Accr-Chr8 32479352 32484397 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01290 7 418 CBL-interacting serine-threonine protein kinases AT1G01140 49.400 2.07e-145 421
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Accr8g01290 Pkinase 1.9e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01290 - - qsa:O6P43_022288 679.863