Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01270 ATGTCCCTCACCATTTTCATGCTGTGTTTATTCCTAAACACAGCATACTCCGACAAGAACATGAGTACTGATAATGTCGGATTCCTGATTCATGGTGGATACTTCAAGTTAGGACCAGGTAGTGATCAAGAACTCAAAAATACCAACATGTCCCGACATATAATAGATGCCGATAGTGGTCTAAGTGAAGCATGGCAAGTCTTTTACAATCTTCCTCTTCAATTCAAGAATTTCAATAATACTACTACTTCTTCTCATGTCTCCTCTTTCTCTACCACTTTCATCTTTGTAATAATAGCCAACGATCCTAAATTTCACGGCCATGGACTCGCCCTTGCTTTCTCGCCTACCAGATTTATTCCTGAAGGTCAGCCAAACCAATATCTTGGCCTATTTAATGCCACCTCCAACGGTGAAAGTTCCAATCATATTGTGGCAATAGAACTTGACACTGACAAGGATTATCAGTGGATTGATATTGATGACAACCATCTTGGGATTGATATCAATGGATTGGACTCTGTCAATGAATCTTCTGCAGGTTACTATACTGATCGTGGTCGTTTTGTAAAGCTTGAACTTTCATGTGGAGAACCCATGCAGGTTTGGGTTGAATACAATAGTACAGGTCAGAAACTTAGTGTAACAATTCATCCAATAAACATACCTAAACCTGAAATCCCTCTTCTCACACTGAAAAGAGATCTTTCTTCTTATTTCTCTGAGTTTATGTATGTTGGATTCTCATCCTCTAGTGGCTCTAGTTCGTCTCATTACATATTGGGTTGGAGTTTCAGGATGAATGGTCAAGCTGAGCAGATTAATCTTTCTCGCCTTCCTAACATTCGTGGAATTGTAGATCCAAATAAAAGGGTTGGAGGAGGAAAAGAATATAAGAAAATATTGATAGTTATATTATCATTAGTGTGTTTGGTTATCCTTTTAACCTTGGTTTATGGTGTGATTATGATTGGAAGGAGGAGGAAATTTATTCAAGTTCTTGAAGATTGGCAAGTATTGTATGGGCCTCATAGGTTCACTTACAAGGACTTGTTCATTGCAACAGAAGGGTTTAGAAGGGGACAACGTTTAGGGAGAGGAGGTTTTGGCAGTGTATACAAAGGAATCCTACCATTTTCCAATGTTCAAATTGCGGTGAAGAGGATATCTCATAATTCAAGACAAGGAATGAGAGAATTCGTTGCAGAAATCGCAACCATAGGTCGGCTCCGGCATCAAAATTTGGTAAGACTTCTTGGCTATTGCAGAAGGAAAAATGAACTCTTGTTGGTTTATGACTTTATGCCTAACGGAAGCCTAGACAAGTTCCTTTATAGTCTTCCCAACAACAAAATTCTCAGCTGGAAACAAAGATTCAAGATCATTAAAGATGTTGCATCTGCACTTTTATATCTTCACCAGCAATGGCTTCAAGTTGTTATCCACAGAGACATCAAACCAGCTAATGTACTGATTGACAATGACATGAATGCTAGACTTGGAGATTTTGGCCTCGCCAAGCTATGCGACCATGGAAATGATCCTAAAACATCTCATGTAGCAGGAACTCCTGGCTACATAGACCCGGAAATTGTGCAGAGTGGAAAATCAAACACATGTACTGATATATATTCATTTGGGGTGTTTCTGCTAGAGATTGCTTGTGGAAGAAGACCAATCGAAACTCAGACTTTGCCAGAGAAAGTGGTGCTGATAGATTGGGTTACGGAGTGCTGGGAAAAAGGAGAAATCTGTGAAGTTGTTGATAGTAGACTGGGGGATGAATATGTGGTGGATGAGGCTGAATTGGTGCTCACACTTGGATTGCTCTGTTCACATCCTGTTTCTTCAGCCCGGCCTACTATTTCTAGTGTTGTGCAATATTTAGATGGAGATTCTGAGTTGCCTCATAATTTGTTGGATTTAATGAAGTCTAGAAATTTTGGTGGCTGGTCAGGTCAGGCATATTCTTCATCTTCCTCTAATTTTCCTACTGGCCATGCTTCTATTGCTTATTTGACTTTTACGGAACCATTTGCGTCCTCCGGCCGCTAA 2055 0.399 MSLTIFMLCLFLNTAYSDKNMSTDNVGFLIHGGYFKLGPGSDQELKNTNMSRHIIDADSGLSEAWQVFYNLPLQFKNFNNTTTSSHVSSFSTTFIFVIIANDPKFHGHGLALAFSPTRFIPEGQPNQYLGLFNATSNGESSNHIVAIELDTDKDYQWIDIDDNHLGIDINGLDSVNESSAGYYTDRGRFVKLELSCGEPMQVWVEYNSTGQKLSVTIHPINIPKPEIPLLTLKRDLSSYFSEFMYVGFSSSSGSSSSHYILGWSFRMNGQAEQINLSRLPNIRGIVDPNKRVGGGKEYKKILIVILSLVCLVILLTLVYGVIMIGRRRKFIQVLEDWQVLYGPHRFTYKDLFIATEGFRRGQRLGRGGFGSVYKGILPFSNVQIAVKRISHNSRQGMREFVAEIATIGRLRHQNLVRLLGYCRRKNELLLVYDFMPNGSLDKFLYSLPNNKILSWKQRFKIIKDVASALLYLHQQWLQVVIHRDIKPANVLIDNDMNARLGDFGLAKLCDHGNDPKTSHVAGTPGYIDPEIVQSGKSNTCTDIYSFGVFLLEIACGRRPIETQTLPEKVVLIDWVTECWEKGEICEVVDSRLGDEYVVDEAELVLTLGLLCSHPVSSARPTISSVVQYLDGDSELPHNLLDLMKSRNFGGWSGQAYSSSSSNFPTGHASIAYLTFTEPFASSGR 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01270 684 ProSitePatterns Protein kinases ATP-binding region signature. 364 387 IPR017441 GO:0005524
Accr8g01270 684 CDD STKc_IRAK 371 631 - -
Accr8g01270 684 ProSiteProfiles Protein kinase domain profile. 358 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01270 684 Gene3D Transferase(Phosphotransferase) domain 1 435 644 - -
Accr8g01270 684 FunFam Lectin-domain containing receptor kinase A4.3 343 434 - -
Accr8g01270 684 ProSitePatterns Serine/Threonine protein kinases active-site signature. 480 492 IPR008271 GO:0004672|GO:0006468
Accr8g01270 684 Pfam Protein kinase domain 359 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01270 684 SUPERFAMILY Protein kinase-like (PK-like) 340 641 IPR011009 -
Accr8g01270 684 Gene3D - 42 284 - -
Accr8g01270 684 CDD lectin_legume_LecRK_Arcelin_ConA 66 269 IPR001220 GO:0030246
Accr8g01270 684 FunFam L-type lectin-domain containing receptor kinase S.4 435 641 - -
Accr8g01270 684 Pfam Legume lectin domain 66 279 IPR001220 GO:0030246
Accr8g01270 684 SUPERFAMILY Concanavalin A-like lectins/glucanases 66 282 IPR013320 -
Accr8g01270 684 SMART serkin_6 358 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01270 684 PANTHER - 49 633 - -
Accr8g01270 684 Gene3D Phosphorylase Kinase; domain 1 343 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01270 Accr-Chr8 31921706 31923878 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01270 66 684 Receptor kinase-like Gene Family AT4G29050 56.800 0.0 720
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Accr8g01270 Pkinase 1.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01270 - - pcin:129301411 1041.95