Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01252 ATGGGTTTATGTAGATTTTCCTTGTTTGCTTTTTTCTCTGTGGTCGTTGTTCATTTATTAGGAGTTCATGGGGAAGAAAAAGCTGACCTTGTGAGTGATAAAAGTTCTCTGATATCATTCATGAGAGGCATTGTTTCTGACCCAAAGTACACTCTAGCAAGCTGGAAATCTCCAGAAATTCATGTCTGTAATTGGTCAGGCATAAGATGCAACAATGCAAGTGATAGAGTCATAGAGATTAATCTCAATGGGAAATCACTAGGAGGCACAATCTCCCCTGCTATTTCCAACCTCTCTTCCTTGAAAATTCTTGATCTTTCTGAGAATTTCTTTGTGGGTCACATTCCAAAAGAGTTGGGCTTCTTAACTCAACTAGGGCAACTCAGTTTATCTTGGAATTTCCTTGAAGGAGAAATCCCAGCTGAGATGGGTTCACTTCATAACTTATACTACCTTGACTTGGAAAGCAACCAGCTTCATGGTGAGATTCCAGCTTCACTTTTCTGTAATGGGTCTTCCTCATTGAGGTATATAGACCTCTCTAACAATTCCTTAGGGGGTCATATACCATTGAACAACGAGTGTATGCTTTTAGAGGTTAGTTTCCTCTTACTTTGGTCTAATAAGCTAGTTGGCCAAATTCCTCTTGCTCTTTCTAACTCCACACAGCTCAAATGGCTTGATTTGGAGTCAAATATGCTGAGTGGAGAGTTACCACACGAGATTGTAAGTTGGCCTGAACTACAATTCCTTTATTTGTCAGGTAATGACTTTGTTAGCCATGATGGAAACACCAACCTTGAACCTTTCTTTACTTCTTTGACAAATTTATCTAACCTTCAAGAACTTGAATTAGCAGAAAACAATCTTGGTGGGAAGCTTCCTTCTAACATTGGTGATCTTCCTAAAAGCCTTGTACAGCTTCACCTTGAGAGCAATCTTATTTATGGCCCTATTCCTCCTCAAATATCCAACCTTGTTAACCTGACTCTTTTGAATTTTTCCAGTAATATACTAAATGGTTCTATCCCTCCTAGCCTATGCAAGATGGGAAAGCTTGAGAGAATCTTTTTGTCCAATAATTCACTCTCTGGTGAGATTCCTTCAGCACTTGGCCGCATTCAACATCTGGGCCTTCTAGACTTGTCAAGAAACAAGCTTTCTGGATCTATACCAGATAGTTTTGCTAACCTTCCTCAGTTAAGAAGGCTTTTGCTTTATGAAAACCAGCTTTCTGGAACAATCCCGCCGAGTCTTGGCAAATGCGTCAATTTGGAGATTTTGGACCTATCAAGAAACAGAATTTCTGGGGTGATTCCTGCTGAAGTTGCTGCCTTGACTAGCTTGAAACTATACTTGAACTTATCAAGCAACAACTTGATCGGCCATTTACCATTAGAGCTCAGCAAAATGGACATGGTGCTAGCTATTGACTTATCTAACAACAATCTCTCAGGCAGAATCCCACCTCAACTCGAAAGCTGCATAGCTTTAGAATACCTTAACCTTTCTGGAAACTCCTTAGAGGGCCCTCTTCCTTTTTCATTAGGTGAATTGCCTTACATAAAGGCCCTTGATGTCTCTTCAAATAGGTTGACTGGGGCGATACCGGAGTCCCTTCTGTTATCATCCACTCTGAAGAAACTCAATTTCTCCTTCAACAAGTTCTCAGGGAATATACCAAACAAGGGAGCAATTTCATCTCTCACCATAGACTCTTTCCTAGGAAATGATGCTCTATGTGGTTCCATAAAAGGGATGCAAAGCTGCCACAAGAAACCCAGCTATCATTTTGTTCTCCTTATAATTCCTGTGTTTCTATTTGCCAATCCCCTCTTGTGCATGTTTGGCTACCGGTTGGCGCGCTGGGCGAAATTTCAAAGGCGAATGGTGATATTTGGCAGAAAACACTATGAGAATGATGAAGAGGAAACAGAGGAGCTAAAGTACCCAAGCATTTCATATAAACAACTTATTGAAGCCACTGGAGGCTTCAGTTCTTCAAGCTTAATTGGTTCAGGAAGATTTGGGCATGTCTACAAAGGAGTCCTTAGAGATAACACCAAAATAGCAGTGAAGGTGTTAGATACCACCGCAGAATGTGAATTTTCAGGGAGTTTTAAAAGAGAGTTTCAAATTTTGAAAAGGACTAGGCACAGAAACTTGATAAGGATCATCACAATTTGCAGCAAGCCAGAGTTTAAGGCTCTTGTTCTTCCTTTAATGCCAAATGGAAGCCTTGAGAGGCACCTATATCCAAGCCATGGGTTGAGCCACAGGTTAAATTTAGTTCAGATAGTGAGGATTTGTAGTGATGTGGCTGAAGGAATGGCCTATTTGCACCATTACTCACCAGTAAGAGTGATCCACTGTGATCTCAAACCAAGCAATATACTTCTCGACGATGATATGACAGCTTTGGTTACTGATTTTGGAATTGCAAGGCTTGTGAAAGGTGATGAGAGTATGGATTTGAGTAATAGCTCGGCATCTTTCAGTTCAACACATGGCTTGCTGTGTGGTTCAGTTGGCTATATAGCCCCTGAGTATGGAATGGGGAAAAAAGCATCAATGCAAGGTGATGTATACAGTTTTGGAGTTTTATTACTAGAAATAGTGACAGGTAGGCCGCCCACAGATGTTCTTGTCCATGAAGGCTCAAGTTTGCATGAGTGGGTAAAGAGACAATATCCATACAAGCTAGACAACATTGTTGACAAGGCATTACAAAGGTTGTCACATTATTCTGGTCAACATGACAGCAACAAGTTCTGGCAAGATGTTGTACTTGAACTCATAGAACTGGGACTTCTCTGCACACAGAATAATCCTTTGACAAGGCCTAGCATGTTGGATGTGGCTCAAGAATTGGGCAGGTTGAAGGATTACTTGTGTAATAATCCATCATCCTCTTTGCTAATTGATGAAGCTGTCAACTCTAAGGTTAATGATTTCTTTCGTAGTGAAGATAATTTACTTGAAAAGTAA 2988 0.4056 MGLCRFSLFAFFSVVVVHLLGVHGEEKADLVSDKSSLISFMRGIVSDPKYTLASWKSPEIHVCNWSGIRCNNASDRVIEINLNGKSLGGTISPAISNLSSLKILDLSENFFVGHIPKELGFLTQLGQLSLSWNFLEGEIPAEMGSLHNLYYLDLESNQLHGEIPASLFCNGSSSLRYIDLSNNSLGGHIPLNNECMLLEVSFLLLWSNKLVGQIPLALSNSTQLKWLDLESNMLSGELPHEIVSWPELQFLYLSGNDFVSHDGNTNLEPFFTSLTNLSNLQELELAENNLGGKLPSNIGDLPKSLVQLHLESNLIYGPIPPQISNLVNLTLLNFSSNILNGSIPPSLCKMGKLERIFLSNNSLSGEIPSALGRIQHLGLLDLSRNKLSGSIPDSFANLPQLRRLLLYENQLSGTIPPSLGKCVNLEILDLSRNRISGVIPAEVAALTSLKLYLNLSSNNLIGHLPLELSKMDMVLAIDLSNNNLSGRIPPQLESCIALEYLNLSGNSLEGPLPFSLGELPYIKALDVSSNRLTGAIPESLLLSSTLKKLNFSFNKFSGNIPNKGAISSLTIDSFLGNDALCGSIKGMQSCHKKPSYHFVLLIIPVFLFANPLLCMFGYRLARWAKFQRRMVIFGRKHYENDEEETEELKYPSISYKQLIEATGGFSSSSLIGSGRFGHVYKGVLRDNTKIAVKVLDTTAECEFSGSFKREFQILKRTRHRNLIRIITICSKPEFKALVLPLMPNGSLERHLYPSHGLSHRLNLVQIVRICSDVAEGMAYLHHYSPVRVIHCDLKPSNILLDDDMTALVTDFGIARLVKGDESMDLSNSSASFSSTHGLLCGSVGYIAPEYGMGKKASMQGDVYSFGVLLLEIVTGRPPTDVLVHEGSSLHEWVKRQYPYKLDNIVDKALQRLSHYSGQHDSNKFWQDVVLELIELGLLCTQNNPLTRPSMLDVAQELGRLKDYLCNNPSSSLLIDEAVNSKVNDFFRSEDNLLEK 995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01252 995 ProSitePatterns Protein kinases ATP-binding region signature. 671 693 IPR017441 GO:0005524
Accr8g01252 995 Gene3D Ribonuclease Inhibitor 30 197 IPR032675 -
Accr8g01252 995 Pfam Leucine rich repeat 352 411 IPR001611 GO:0005515
Accr8g01252 995 Pfam Leucine rich repeat 203 258 IPR001611 GO:0005515
Accr8g01252 995 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 30 197 - -
Accr8g01252 995 Gene3D Phosphorylase Kinase; domain 1 635 740 - -
Accr8g01252 995 Pfam Protein kinase domain 667 955 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01252 995 SUPERFAMILY Protein kinase-like (PK-like) 644 957 IPR011009 -
Accr8g01252 995 Gene3D Ribonuclease Inhibitor 198 263 IPR032675 -
Accr8g01252 995 SUPERFAMILY L domain-like 328 582 - -
Accr8g01252 995 FunFam Leucine-rich repeat receptor-like protein kinase TDR 274 592 - -
Accr8g01252 995 SMART serkin_6 665 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01252 995 SUPERFAMILY RNI-like 79 364 - -
Accr8g01252 995 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 379 957 - -
Accr8g01252 995 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Accr8g01252 995 Gene3D Ribonuclease Inhibitor 264 597 IPR032675 -
Accr8g01252 995 ProSitePatterns Serine/Threonine protein kinases active-site signature. 788 800 IPR008271 GO:0004672|GO:0006468
Accr8g01252 995 Pfam Leucine Rich Repeat 498 517 IPR001611 GO:0005515
Accr8g01252 995 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 742 970 - -
Accr8g01252 995 ProSiteProfiles Protein kinase domain profile. 665 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01252 995 Gene3D Transferase(Phosphotransferase) domain 1 742 976 - -
Accr8g01252 995 CDD STKc_IRAK 671 960 - -
Accr8g01252 995 SMART LRR_typ_2 98 122 IPR003591 -
Accr8g01252 995 SMART LRR_typ_2 326 350 IPR003591 -
Accr8g01252 995 SMART LRR_typ_2 446 471 IPR003591 -
Accr8g01252 995 SMART LRR_typ_2 277 301 IPR003591 -
Accr8g01252 995 SMART LRR_typ_2 146 170 IPR003591 -
Accr8g01252 995 SMART LRR_typ_2 398 422 IPR003591 -
Accr8g01252 995 SMART LRR_typ_2 374 397 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01252 Accr-Chr8 31443150 31446876 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01252 32 962 Receptor kinase-like Gene Family AT3G47570 35.317 5.33e-163 504
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Accr8g01252 Pkinase 6.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01252 - - qsa:O6P43_022222 1413.28