Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01251 ATGGGTTTATGTAGATTTTCCTTGTTTGCTTTTTTCTCTGTGGTCGTTGTTCATTTATTAGGAGTTCATGGGGAAGAAAAAGCTGACCTTGTGAGTGATAAAAGTTCTCTGATATCATTCATGAGAGGCATTGTTTCTGACCCAAAGTACACTCTAGCAAGCTGGAAATCTCCAGAAATTCATGTCTGTAATTGGTCAGGCATAAGATGCAACAATGCAAGTGATAGAGTCATAGAGATTAATCTCAATGGGAAATCACTAGGAGGCACAATCTCCCCTGCTATTTCCAACCTCTCTTCCTTGAAAATTCTTGATCTTTCTGAGAATTTCTTTGTGGGTCACATTCCAAAAGAGTTGGGCTTCTTAACTCAACTAGGGCAACTCAGTTTATCTTGGAATTTCCTTGAAGGAGAAATCCCAGCTGAGATGGGTTCACTTCATAACTTATACTACCTTGACTTGGAAAGCAACCAGCTTCATGGTGAGATTCCAGCTTCACTTTTCTGTAATGGGTCTTCCTCATTGAGGTATATAGACCTCTCTAACAATTCCTTAGGGGGTCATATACCATTGAACAACGAGTGTATGCTTTTAGAGCTCAAATGGCTTGATTTGGAGTCAAATATGCTGAGTGGAGAGTTACCACACGAGATTGTAAGTTGGCCTGAACTACAATTCCTTTATTTGTCAGAAAACAATCTTGGTGGGAAGCTTCCTTCTAACATTGGTGATCTTCCTAAAAGCCTTGTACAGCTTCACCTTGAGAGCAATCTTATTTATGGCCCTATTCCTCCTCAAATATCCAACCTTGTTAACCTGACTCTTTTGAATTTTTCCAGTAATATACTAAATGGTTCTATCCCTCCTAGCCTATGCAAGATGGGAAAGCTTGAGAGAATCTTTTTGTCCAATAATTCACTCTCTGGTGAGATTCCTTCAGCACTTGGCCGCATTCAACATCTGGGCCTTCTAGACTTGTCAAGAAACAAGCTTTCTGGATCTATACCAGATAGTTTTGCTAACCTTCCTCAGTTAAGAAGGCTTTTGCTTTATGAAAACCAGCTTTCTGGAACAATCCCGCCGAGTCTTGGCAAATGCGTCAATTTGGAGATTTTGGACCTATCAAGAAACAGAATTTCTGGGGTGATTCCTGCTGAAGTTGCTGCCTTGACTAGCTTGAAACTATACTTGAACTTATCAAGCAACAACTTGATCGGCCATTTACCATTAGAGCTCAGCAAAATGGACATGGTGCTAGCTATTGACTTATCTAACAACAATCTCTCAGGCAGAATCCCACCTCAACTCGAAAGCTGCATAGCTTTAGAATACCTTAACCTTTCTGGAAACTCCTTAGAGGGCCCTCTTCCTTTTTCATTAGGTGAATTGCCTTACATAAAGGCCCTTGATGTCTCTTCAAATAGGTTGACTGGGGCGATACCGGAGTCCCTTCTGTTATCATCCACTCTGAAGAAACTCAATTTCTCCTTCAACAAGTTCTCAGGGAATATACCAAACAAGGGAGCAATTTCATCTCTCACCATAGACTCTTTCCTAGGAAATGATGCTCTATGTGGTTCCATAAAAGGGATGCAAAGCTGCCACAAGAAACCCAGCTATCATTTTGTTCTCCTTATAATTCCTGTGTTTCTATTTGCCAATCCCCTCTTGTGCATGTTTGGCTACCGGTTGGCGCGCTGGGCGAAATTTCAAAGGCGAATGGTGATATTTGGCAGAAAACACTATGAGAATGATGAAGAGGAAACAGAGGAGCTAAAGTACCCAAGCATTTCATATAAACAACTTATTGAAGCCACTGGAGGCTTCAGTTCTTCAAGCTTAATTGGTTCAGGAAGATTTGGGCATGTCTACAAAGGAGTCCTTAGAGATAACACCAAAATAGCAGTGAAGGTGTTAGATACCACCGCAGAATGTGAATTTTCAGGGAGTTTTAAAAGAGAGTTTCAAATTTTGAAAAGGACTAGGCACAGAAACTTGATAAGGATCATCACAATTTGCAGCAAGCCAGAGTTTAAGGCTCTTGTTCTTCCTTTAATGCCAAATGGAAGCCTTGAGAGGCACCTATATCCAAGCCATGGGTTGAGCCACAGGTTAAATTTAGTTCAGATAGTGAGGATTTGTAGTGATGTGGCTGAAGGAATGGCCTATTTGCACCATTACTCACCAGTAAGAGTGATCCACTGTGATCTCAAACCAAGCAATATACTTCTCGACGATGATATGACAGCTTTGGTTACTGATTTTGGAATTGCAAGGCTTGTGAAAGGTGATGAGAGTATGGATTTGAGTAATAGCTCGGCATCTTTCAGTTCAACACATGGCTTGCTGTGTGGTTCAGTTGGCTATATAGCCCCTGAGTATGGAATGGGGAAAAAAGCATCAATGCAAGGTGATGTATACAGTTTTGGAGTTTTATTACTAGAAATAGTGACAGGTAGGCCGCCCACAGATGTTCTTGTCCATGAAGGCTCAAGTTTGCATGAGTGGGTAAAGAGACAATATCCATACAAGCTAGACAACATTGTTGACAAGGCATTACAAAGGTTGTCACATTATTCTGGTCAACATGACAGCAACAAGTTCTGGCAAGATGTTGTACTTGAACTCATAGAACTGGGACTTCTCTGCACACAGAATAATCCTTTGACAAGGCCTAGCATGTTGGATGTGGCTCAAGAATTGGGCAGGTTGAAGGATTACTTGTGTAATAATCCATCATCCTCTTTGCTAATTGATGAAGCTGTCAACTCTAAGGTTAATGATTTCTTTCGTAGTGAAGATAATTTACTTGAAAAGTAA 2820 0.4078 MGLCRFSLFAFFSVVVVHLLGVHGEEKADLVSDKSSLISFMRGIVSDPKYTLASWKSPEIHVCNWSGIRCNNASDRVIEINLNGKSLGGTISPAISNLSSLKILDLSENFFVGHIPKELGFLTQLGQLSLSWNFLEGEIPAEMGSLHNLYYLDLESNQLHGEIPASLFCNGSSSLRYIDLSNNSLGGHIPLNNECMLLELKWLDLESNMLSGELPHEIVSWPELQFLYLSENNLGGKLPSNIGDLPKSLVQLHLESNLIYGPIPPQISNLVNLTLLNFSSNILNGSIPPSLCKMGKLERIFLSNNSLSGEIPSALGRIQHLGLLDLSRNKLSGSIPDSFANLPQLRRLLLYENQLSGTIPPSLGKCVNLEILDLSRNRISGVIPAEVAALTSLKLYLNLSSNNLIGHLPLELSKMDMVLAIDLSNNNLSGRIPPQLESCIALEYLNLSGNSLEGPLPFSLGELPYIKALDVSSNRLTGAIPESLLLSSTLKKLNFSFNKFSGNIPNKGAISSLTIDSFLGNDALCGSIKGMQSCHKKPSYHFVLLIIPVFLFANPLLCMFGYRLARWAKFQRRMVIFGRKHYENDEEETEELKYPSISYKQLIEATGGFSSSSLIGSGRFGHVYKGVLRDNTKIAVKVLDTTAECEFSGSFKREFQILKRTRHRNLIRIITICSKPEFKALVLPLMPNGSLERHLYPSHGLSHRLNLVQIVRICSDVAEGMAYLHHYSPVRVIHCDLKPSNILLDDDMTALVTDFGIARLVKGDESMDLSNSSASFSSTHGLLCGSVGYIAPEYGMGKKASMQGDVYSFGVLLLEIVTGRPPTDVLVHEGSSLHEWVKRQYPYKLDNIVDKALQRLSHYSGQHDSNKFWQDVVLELIELGLLCTQNNPLTRPSMLDVAQELGRLKDYLCNNPSSSLLIDEAVNSKVNDFFRSEDNLLEK 939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01251 939 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Accr8g01251 939 Pfam Leucine rich repeat 296 355 IPR001611 GO:0005515
Accr8g01251 939 Pfam Leucine Rich Repeat 442 461 IPR001611 GO:0005515
Accr8g01251 939 Gene3D Transferase(Phosphotransferase) domain 1 686 920 - -
Accr8g01251 939 SUPERFAMILY RNI-like 79 393 - -
Accr8g01251 939 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 296 902 - -
Accr8g01251 939 ProSitePatterns Protein kinases ATP-binding region signature. 615 637 IPR017441 GO:0005524
Accr8g01251 939 ProSiteProfiles Protein kinase domain profile. 609 908 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01251 939 SUPERFAMILY L domain-like 363 507 - -
Accr8g01251 939 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 686 914 - -
Accr8g01251 939 Gene3D Ribonuclease Inhibitor 199 304 IPR032675 -
Accr8g01251 939 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 300 538 - -
Accr8g01251 939 FunFam Leucine-rich repeat receptor protein kinase EMS1 195 285 - -
Accr8g01251 939 ProSitePatterns Serine/Threonine protein kinases active-site signature. 732 744 IPR008271 GO:0004672|GO:0006468
Accr8g01251 939 CDD STKc_IRAK 615 904 - -
Accr8g01251 939 Gene3D Ribonuclease Inhibitor 305 411 IPR032675 -
Accr8g01251 939 Gene3D Ribonuclease Inhibitor 30 198 IPR032675 -
Accr8g01251 939 SMART serkin_6 609 908 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01251 939 Gene3D Phosphorylase Kinase; domain 1 579 684 - -
Accr8g01251 939 SUPERFAMILY Protein kinase-like (PK-like) 588 901 IPR011009 -
Accr8g01251 939 Gene3D Ribonuclease Inhibitor 414 527 IPR032675 -
Accr8g01251 939 Pfam Protein kinase domain 611 899 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01251 939 SMART LRR_typ_2 197 221 IPR003591 -
Accr8g01251 939 SMART LRR_typ_2 270 294 IPR003591 -
Accr8g01251 939 SMART LRR_typ_2 98 122 IPR003591 -
Accr8g01251 939 SMART LRR_typ_2 390 415 IPR003591 -
Accr8g01251 939 SMART LRR_typ_2 146 170 IPR003591 -
Accr8g01251 939 SMART LRR_typ_2 318 341 IPR003591 -
Accr8g01251 939 SMART LRR_typ_2 342 366 IPR003591 -
Accr8g01251 939 SMART LRR_typ_2 222 245 IPR003591 -
Accr8g01251 939 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 30 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01251 Accr-Chr8 31443150 31446876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01251 32 906 Receptor kinase-like Gene Family AT3G47570 34.068 5.83e-153 476
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Accr8g01251 Pkinase 5.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01251 - - qsa:O6P43_022222 1300.42