Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01244 ATGGAAGCTAGCACTGGACTTTTTGCAGGGTCTCACAACAGCAACGAGCTTGTGGTCATACAACCTGAAGAAGAGCCTAAGCCAGTGAAGAACTTAGATGGTCAGCTATGTGAGATTTGTGGTGATTCTGTGGGGTATACGGTGGAAGGAGATTTGTTTGTGGCCTGTGAAGAGTGTGGTTTCCCTGTGTGCAGGCCATGTTATGAGTATGAAAGAAGGGAAGGGACTCAAAATTGCCCTCAGTGCCAGACCAGATACAAGCGAATCAAAGGAAGCCCAAGAGTCGAGGGTGATGAAGATGAAGATGACATCGATGATATTGAGCATGAGTTCAAAATGGAAGAAGAAAAGCACAAGCTCATGATAGGCCGTGGAGAAGATGACAACAATGGATCATTACCAGTAGTAACAGCCAAGGTGAATGGAGAGATTCTCAATGGAAATGCAGAGTTGGATGGAAAGACAGAGATATCAGAGGACTGGAAGATGCACCAAGGCAATCTGTGGCCTGAGACTGATGCATCAGTTGATCCTGAAAAGGCCATGAGAGAAGAAGCTAGAAAGACACTCTCAAGGAAAGTAGCAATACCATCAGGCAGACTCAGCCCTTACAGGATGATGGTCGCAGCTCGGCTTGTGATTCTATTATTGTTCCTTCAGTACAGAGTCCTACACCCAGTACCTGACGCAATTGGACTCTGGCTTACATCTGTAGTATGTGAAATATGGCTTACATTGTCATGGATAATAGATCAGATTCCAAAATGGTTTCCCATTGACCGGGAGACATACCTTGATCGGCTTTCACTCAGGTTTGAACCAGAGAACAAGCCAAATTTGTTTCCTCCAGTAGATGTATTTGTCACTACTGTGGATCCAATTAAGGAACCGCCACTAATTACGGCTAATACTGTTCTTTCAATCTTGGCCATGGATTACCCTGCTAATAAAATATCATGCTATGTTTCTGATGATGGAGCTTCCCTGCTCACCTTTGAAGCTCTCCAAGAAACTGTAGAGTTTGCACGGAAGTGGGTACCCTTCTGCAGAAACTATTCTCTAGAGCCTCGTGCACCAGAGAAGTACTTCTCTGAGAAGATTGATTTTCTAAAGGATAAGGTCCAGTCTACTTATGTCAGAGACCGCCGTACGATGAAGAGAGAATATGAAGAATTCAAGGTCAGGATAAATTCACTCGTGGCTAAATCCATGAGAATTCCCCAAGAAGGGTGGACTATGCAAGATGGAACACCATGGCCTGGAAACAATACCAATGATCACCCAGGTATGATACAAATTCTTCTTGCTCGGAGTGGAGGCGTTCAAGGAAATGAACTTCCATGTCTTGTCTACCTGTCTCGTGAGAAAAAACCAGGGTTTCAACACCACAGCAAAGCTGGTGCCTTAAATGCATTGCTTCGGGTATCTGCATTGTTAAGCAATGCTCCTTTTGTGCTGAACTTGGATTGTAATCACTATGTGAACAATAGCAAGGCTGTGAGAGAGGCCATGTGTTTCTTCATGGACCTACAATTTGGAAAGAGCATATGCTTTGTCCAGTTCCCGCTAAGATTTGACAGCCTTGATAAGCATGATCGTTATGCCAACAGAAATACTGTTCTATTTGATATAAACTTGAGGTGCCTTGATGGAATTCAAGGACCTATTTATACTGGCTCAGGATGTGTCTTCCGAAGGAAAGCTTTAAATGGCAGTGAACCTCCAAAGACTTCAAAGCGCCCAAAAATGGTAGGCTGTGGATGCTGTCCTTGTTTTGGATCACGCAAGAAGCTACAAGTGCACTCTAAGCATGATGATGGCAATGAAGATGAGCCAACCATGACAGGAATAGATGAAGACAAGCAGCTTTTAACATCAGAGATGAATTTTGAAAATAAATTTGGGAAATCTGCAGTTTTTGTGAACTCTTCCATAAATGAAGAGGGTGGTATTCCTTCTACCTCTAATCAGGAAGCCTTGCTTAAAGAAGCCATTCATGTCATGAGTAGCCGCTATGAAGACAGAACCCTATGGGGATACGAGGTCGGTTGGAACTATGGATCTATATCATCAGATCTTCTGACAAGTTTTAAAATGCACTCTCTTGGTTGGAGATCTGTGTACTGCATGCCAGAAAGACCTGCTTTCAGGGGTACTGCTCCTATCAACCTTTCAGATCGACTCAGTCAAGTGCTAAGATGGGCAGTTGGATCACTTGAGATCCTTTTCAGCCGCCACTGCCCAATATGGTATACCTTAGGAGAAGGAAAACTCAAGGGACTTCAAAGAATTGCCTATATCAACAGCACAGTCTACCCTTTCAGCTCAATACCCCTTATAATATATTGTCTCCTTCCTGCCGTCTGCCTGCTCACAGACAAATTCATCACACCATCGATAAGTACCTTTGCAAGCCTTATCTTCATTGCACTGTTCATATCAATCTTTGCATCAAGCATTCTTGAGTTGAGATGGAGTGGAGTTACTCTTGAGGAATGGTGGAGAAATGAGCAATTCTGGGTTATCGGCAGCGTCTCAACGCACCTCTTTGCAATAGTGAGAAACTTTCTGAAGGCTGTGTCTAAAGTCGATACTAACTTCAGTGTCATATCAAAAGTACCAGATAATGGGGAGTTCCATGACCTGTACACCTTTAGATGGACAGCCCTGCTAATACCTCCAACCACTATCATAATCATCAACCTTGTTGGTATTGTAGCTGGGTTTACAGATGCCATAAACAGTGGTGGACAATCTTGGGGAGCATTACTTGGGAAACTCTTCTTCTCCTTCTGGGTTCTGGTCCATCTATACCCATTCCTCAAAGGAATGATGGGTAAACAAAACCGAACACCAACCCTTGTTATCATATGGTCAGTGCTTTTGGCTTCTATCTTCTCCTTGCTTTGGGTAAGAATTGATCCTTTTGTGTTGAAAACAAAAGGGCCTGACGTTAAGCAGTGTGGAATCAGTTGCTGA 2979 0.435 MEASTGLFAGSHNSNELVVIQPEEEPKPVKNLDGQLCEICGDSVGYTVEGDLFVACEECGFPVCRPCYEYERREGTQNCPQCQTRYKRIKGSPRVEGDEDEDDIDDIEHEFKMEEEKHKLMIGRGEDDNNGSLPVVTAKVNGEILNGNAELDGKTEISEDWKMHQGNLWPETDASVDPEKAMREEARKTLSRKVAIPSGRLSPYRMMVAARLVILLLFLQYRVLHPVPDAIGLWLTSVVCEIWLTLSWIIDQIPKWFPIDRETYLDRLSLRFEPENKPNLFPPVDVFVTTVDPIKEPPLITANTVLSILAMDYPANKISCYVSDDGASLLTFEALQETVEFARKWVPFCRNYSLEPRAPEKYFSEKIDFLKDKVQSTYVRDRRTMKREYEEFKVRINSLVAKSMRIPQEGWTMQDGTPWPGNNTNDHPGMIQILLARSGGVQGNELPCLVYLSREKKPGFQHHSKAGALNALLRVSALLSNAPFVLNLDCNHYVNNSKAVREAMCFFMDLQFGKSICFVQFPLRFDSLDKHDRYANRNTVLFDINLRCLDGIQGPIYTGSGCVFRRKALNGSEPPKTSKRPKMVGCGCCPCFGSRKKLQVHSKHDDGNEDEPTMTGIDEDKQLLTSEMNFENKFGKSAVFVNSSINEEGGIPSTSNQEALLKEAIHVMSSRYEDRTLWGYEVGWNYGSISSDLLTSFKMHSLGWRSVYCMPERPAFRGTAPINLSDRLSQVLRWAVGSLEILFSRHCPIWYTLGEGKLKGLQRIAYINSTVYPFSSIPLIIYCLLPAVCLLTDKFITPSISTFASLIFIALFISIFASSILELRWSGVTLEEWWRNEQFWVIGSVSTHLFAIVRNFLKAVSKVDTNFSVISKVPDNGEFHDLYTFRWTALLIPPTTIIIINLVGIVAGFTDAINSGGQSWGALLGKLFFSFWVLVHLYPFLKGMMGKQNRTPTLVIIWSVLLASIFSLLWVRIDPFVLKTKGPDVKQCGISC 992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01244 992 SUPERFAMILY Nucleotide-diphospho-sugar transferases 296 815 IPR029044 -
Accr8g01244 992 CDD mRING-HC-C4C4_CesA 35 85 - -
Accr8g01244 992 SUPERFAMILY RING/U-box 22 107 - -
Accr8g01244 992 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 20 109 IPR013083 -
Accr8g01244 992 ProSiteProfiles Zinc finger RING-type profile. 37 83 IPR001841 -
Accr8g01244 992 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 273 372 IPR029044 -
Accr8g01244 992 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 420 573 IPR029044 -
Accr8g01244 992 Pfam Cellulose synthase 284 986 IPR005150 GO:0016020|GO:0016760|GO:0030244
Accr8g01244 992 Pfam Zinc-binding RING-finger 27 103 IPR027934 -
Accr8g01244 992 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 188 959 - -
Accr8g01244 992 FunFam Cellulose synthase 20 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01244 Accr-Chr8 31346060 31350774 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01244 1 992 Cell Wall Biosynthesis AT5G17420 67.153 0.0 1444