Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01243 ATGGAAGCCAGCGCTGGACTTGTCGCTGGTTCTCACAACCGCAACGAGCTTGTCGTCATTCACGGCCACGAAGAGCATAAGCCTTTGAAGAATTTGGATGGCCAAGTCTGTGAGATATGCGGTGACGACGTTGGACTCACCGTGGACGGCGACTTGTTTGTCGCCTGCAATGAGTGTGGTTTCCCGCTTTGCCGTCCCTGCTATGAATATGAACGAAGAGAAGGCAGCCAACTCTGCCCTCAGTGCAAGACCAGATACAAGCGTCTCAAAGGAAGCCCTAGGGTGGAGGGAGACGAAGATGAGGAGGACGTGGATGATATAGAACATGAATTCAAGATCGCAGCAGACGAGAAGAACAAGCACAACCATATGGCAGAGGCCATGCTGCATGGCAAGATGAGCTATGGAAGAGGCCCTGAGGATGATGACAATGCTCAATTCCCACCTGTCATCGCCGGAAACCGCTCCCGTCCGGTGAGTGGTGAATTCTCAATATCATCTCATGGTTATGGAGACCAGATGCTTCCCTCTTCTCTCCACAAACGCGTTCATCCTTATCCAGTTTCTGAACCTGGAAGTGCAATAGGGGAGGAGAAGAACGAGGATGGCTGGAAAGATAGAATGGACGACTGGAAACTCCAGCAAGGAAACTTGGGGCCTGAACCTGATGAAGATCCTGATGCAGCCTTGATAGATGAAGCGAGGCAGCCATTGTCAAGGAAAGTACCAATAGCATCAAGCAAAGTAAATCCGTACAGAATGGTGATAGTGGCACGTCTCGTAATTCTGGCCTTCTTCCTCCGATACAGAATTATGAACCCGGTTCATGACGCCATAGGCCTCTGGCTCACCTCCATTATCTGCGAAATCTGGTTTGCTTTCTCATGGATCCTCGATCAGTTCCCCAAATGGTTCCCGATCGAACGCGAGACCTACCTCGATCGTCTCTCCGTGAGGTATGAGAGGGAAGGGGAGCCGAATATGCTGGCGCCGGTGGATGTGTTTGTGAGTACGGTGGATCCGATGAAGGAACCGCCATTGGTGACGGCGAACACGATTCTGTCGATATTGGCGATGGATTATCCGGTGGATAAGATATCGTGTTATATATCGGACGATGGAGCTTCCATGTGTACGTTCGAAGCGCTCTCGGAGACGGCGGAGTTTGCGAGGAAGTGGGTTCCGTTTTGTAAGAAGTTCGCGATCGAGCCAAGAGCTCCTGAGATGTACTTCTGTGAGAAGATTGATTACCTGAAAGATAAGGTTCAGCCCACCTTCGTCAAGGAGCGTCGAGCTATGAAGAGAGAATACGAAGAGTTCAAGGTCAGAGTGAACGCACTTGTGGCGAAAGCCCAGAAAGTTCCAGCAGGAGGATGGATTATGCAGGATGGGACTCCATGGCCAGGCAACAACACGAAGGACCATCCCGGTATGATCCAAGTGTTTCTCGGCCACAGTGGCGGCTGCGACACCGACGGCAACCTTCTTCCTCGTCTGGTTTATGTATCCAGAGAGAAAAGGCCTGGTTTTGCTCACCACAAGAAAGCTGGTGCCATGAATGCTCTGGTTCGGGTCTCAGCTGTGCTCACAAATGCTCCTTTCATGCTCAACTTGGATTGTGATCACTATATCAATAACAGCAAGGCTGTCAGAGAGGCCATGTGCTTCTTGATGGATCCCCAAACTGGAAAGAAAGTCTGTTATGTCCAATTCCCTCAGAGATTTGATGGCATTGATAGGCACGATCGTTATGCCAACAGGAACACTGTCTTCTTTGATATTAACATGAAGGGTCTAGATGGTATCCAGGGTCCTGTGTATGTGGGGACAGGATGTGTGTTCAGGAGGCAAGCTTTATACGGATACAATCCTCCAAAGGGTCCTAAACGCCCCAAGATGGTAAGTTGTGATTGCTGCCCATGTTTTGGACGCCGCAGGAAGCAAAAGTATGCAAAGGATGGTGCAAATGCTGAGTCTGCAATGCTACAACAAGGAATGGAAGATGATAAAGAGTTGCTCATGTCTCAGATGAATTTTGAAAAGAAATTTGGGCAATCATCTATTTTTGTCACTTCAACTTTGATGGAGGAAGGTGGTGTGCCTCCTTCCTCAAGCCCAGCAGCTCTGCTCAAAGAAGCAATTCATGTCATAAGCTGTGGCTATGAGGATAAAACCGAATGGGGAACCGAGCTGGGTTGGATCTATGGATCTATTACTGAGGATATCCTAACAGGTTTCAAGATGCATTGCCGTGGTTGGAGGTCAATTTACTGCAACCCAAAGAGGCCCGCATTCAAGGGTACAGCTCCAATCAACTTGTCAGATCGGCTCAATCAGGTGCTTCGTTGGGCGCTGGGTTCGATTGAGATCTTCTTCAGTCCCCATTGCCCTGCTTGGTATGGCTACAAGGGTGGCAACAAGCTCAAGTGGCTCGAGCGATTCGCCTATGTCAACACCACTGTCTACCCTTTCACTTCTCTTCCTCTACTTGCCTACTGTATTCTTCCTGCTATTTGCTTGCTCACTGACAAGTTCATCATGCCACCGATAAGCACTTTTGCCGGTTTGTACTTCGTTGCCTTGTTCTCTTCCATCATTGCGACGGGCTTGCTTGAGTTGAAATGGAGTGGAGTAAGCATAGAGGAATGGTGGAGAAACGAGCAATTCTGGGTCATTGGTGGTGTATCAGCACATCTGTTTGCTGTCATACAAGGTCTTCTCAAGGTCCTAGCTGGAATCGACACAAACTTCACTGTTACATCAAAGGCAGCAGATGATGAGGACTTTGGTGAATTATACACCTTTAAATGGACCACTCTCCTAATCCCACCAACCACTATACTAATCATCAATATTGTTGGTGTTGTTGCTGGAATCTCAGATGCAATCAACAATGGCTACCAATCTTGGGGACCTCTATTTGGAAAGCTCTTCTTTTCCTTCTGGGTCATTGTTCATCTCTACCCATTCCTTAAAGGTTTGATGGGAAGACAAAACAGAACACCCACCATAGTTGTGATATGGTCAGTGCTCATGGCTTCTATTTTCTCTCTGCTTTGGGTGAGAATTGACCCATTTGTGATGAAAACTAAGGGTCCTGATACCAAGATGTGTGGAATCAACTGCTGA 3129 0.4826 MEASAGLVAGSHNRNELVVIHGHEEHKPLKNLDGQVCEICGDDVGLTVDGDLFVACNECGFPLCRPCYEYERREGSQLCPQCKTRYKRLKGSPRVEGDEDEEDVDDIEHEFKIAADEKNKHNHMAEAMLHGKMSYGRGPEDDDNAQFPPVIAGNRSRPVSGEFSISSHGYGDQMLPSSLHKRVHPYPVSEPGSAIGEEKNEDGWKDRMDDWKLQQGNLGPEPDEDPDAALIDEARQPLSRKVPIASSKVNPYRMVIVARLVILAFFLRYRIMNPVHDAIGLWLTSIICEIWFAFSWILDQFPKWFPIERETYLDRLSVRYEREGEPNMLAPVDVFVSTVDPMKEPPLVTANTILSILAMDYPVDKISCYISDDGASMCTFEALSETAEFARKWVPFCKKFAIEPRAPEMYFCEKIDYLKDKVQPTFVKERRAMKREYEEFKVRVNALVAKAQKVPAGGWIMQDGTPWPGNNTKDHPGMIQVFLGHSGGCDTDGNLLPRLVYVSREKRPGFAHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYINNSKAVREAMCFLMDPQTGKKVCYVQFPQRFDGIDRHDRYANRNTVFFDINMKGLDGIQGPVYVGTGCVFRRQALYGYNPPKGPKRPKMVSCDCCPCFGRRRKQKYAKDGANAESAMLQQGMEDDKELLMSQMNFEKKFGQSSIFVTSTLMEEGGVPPSSSPAALLKEAIHVISCGYEDKTEWGTELGWIYGSITEDILTGFKMHCRGWRSIYCNPKRPAFKGTAPINLSDRLNQVLRWALGSIEIFFSPHCPAWYGYKGGNKLKWLERFAYVNTTVYPFTSLPLLAYCILPAICLLTDKFIMPPISTFAGLYFVALFSSIIATGLLELKWSGVSIEEWWRNEQFWVIGGVSAHLFAVIQGLLKVLAGIDTNFTVTSKAADDEDFGELYTFKWTTLLIPPTTILIINIVGVVAGISDAINNGYQSWGPLFGKLFFSFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLMASIFSLLWVRIDPFVMKTKGPDTKMCGINC 1042
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01243 1042 MobiDBLite consensus disorder prediction 182 201 - -
Accr8g01243 1042 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 235 1009 - -
Accr8g01243 1042 CDD mRING-HC-C4C4_CesA 35 85 - -
Accr8g01243 1042 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 20 109 IPR013083 -
Accr8g01243 1042 ProSiteProfiles Zinc finger RING-type profile. 37 83 IPR001841 -
Accr8g01243 1042 FunFam Cellulose synthase 19 110 - -
Accr8g01243 1042 Pfam Zinc-binding RING-finger 27 104 IPR027934 -
Accr8g01243 1042 Coils Coil 430 450 - -
Accr8g01243 1042 FunFam Cellulose synthase 449 623 - -
Accr8g01243 1042 SUPERFAMILY RING/U-box 21 105 - -
Accr8g01243 1042 Pfam Cellulose synthase 332 1036 IPR005150 GO:0016020|GO:0016760|GO:0030244
Accr8g01243 1042 SUPERFAMILY Nucleotide-diphospho-sugar transferases 345 822 IPR029044 -
Accr8g01243 1042 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 493 623 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01243 Accr-Chr8 31337395 31343984 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01243 1 1042 Cell Wall Biosynthesis AT5G17420 85.427 0.0 1831
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01243 K10999 - gmx:100815436 1987.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g01243 8 31337395 31343984 Accr8g01243 8 31337395 31343984 ECH