Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01224 ATGAAGGAGAAGAGAGCGTCTAATATTTACAGGTTGGATGACCTGGACTCTAGGCTCTCTTCATCTTTTGATACTCGAATTAAGAAAAGTGGATTTATTGTTGAGAAATTAAACCATGGTAGCCATGCAAGCACTGCAACCTCTAGGTCTTTCAAAAGAGGAATGATAAAAGGATCTGAAGGACTGAAGTCAATTGGACGATCACTTGGATTCGGGGTATCTAAGGTAGTATTCCCTGAAGATCTGAAAGTGTCAGAGAAGAAGATATTTGATCCTCAAGACAAATTTTTGCTCCTATTGAATAAACTTTTTGTTTTCTCATGCATTTTGGCTGTGTCTCTGGATCCATTATTTTTCTACCTCCCTTTCATCAATGGTCTATCCAACTGCCTTGGTATAGATCAGAAAATGGCAATCATTGTCACCGCCTTGAGGACGGCCGTTGATGTTTTCTATCTTATACACATGGCTCTTCAATTCCGCACTGCCTATATTGCCCCATCGTCTCGTGTCTTTGGACGGGGGGAGCTTGTAATAGATTCAACACAGATAGCCAAGCGATACTTACGGCGGTATTTCATTGTTGACTTTCTATCTGTGCTGCCCTTACCACAGATTGTGGTTTGGAGATTTCTTCAAAAATCAAAAGGTTTGGATGTATTAGCAACAAAGCAGGCCTTGCTGTATATTATCTTACTACAGTATGTTCCTAGGCTTCTCCGGACGGTACCACTGACTTCTGAACTTAAGAGAACCGCTGGTGGCTTTGCTGAAACTGCATGGGCAGGTGCTGCATATTATTTGATGTTATACATGCTTGCTAGTCATGCAGTTGGGGCTTTTTGGTACTTGTTTGCTGTTGAACGCAATGACACATGCTGGCAGGAGGCATGCATGCAACCAGGGTGCAAAAAGGATTTCTTGTATTGTGGTAACCAGTGGATGGAAGGTTATAATGACTGGAACAGTACAGTTCTCAATGATCAGTGCTCTTCAAACGACAATTCACCTTTTAATTTTGGAATTTTTAAACCAGCATTGTCATCTGGCATTATCTCATCTAAACAATTTGTGTCCAAATACTTTTACTGTTTATGGTGGGGGCTCCAGAATTTGAGCACTCTTGGCCAGGGATTTCAAACCAGCAATTATCCGTGGGAAAACATTTTTTCAATAGCACTAAACACATTAGGTCTTATCCTCTTGGCACTTCTAATTGGTAACATGCAGACCTATCTTCAGTCTATTACCATAAGGCTTGAGGAAATGAGAGTCAAAAGGCGTGATTCCGAACATTGGATGCATCATCGTTTGCTCACACCGTATCTGAGAGGGCGGGTGAGACGCTATGATCAATATAAGTGGTTAGCAACACGTGGTGTGGATGAAGAAAGTTTGGTTCAGACACTTCCAAAGGATCTTAGAAGAGATATCAAGCGTCACCTCTGTCTGGCTTTAGTGACAAGGGTTCCGTTGTTTGAGAGCATGGATGACAGGCTGCTTGATGCCATTTGTGAAAGACTGAAACCTTGTTTATTTACTGAGAATAGTTACATTGTACGGGAAGGAGATCCAGTTGAAGAGATGATTTTCATCATTCGTGGTCGACTCGAAAGTGTTACCACAGATGGTGGTAGGAGTGGATTTTTTAACTGTAGTCTCCTTCAAGAGACCGACTTCTGTGGAGAGGAGCTTCTAACCTGGGCACTTGATCCAAGATCTGGTTCTAACCTCCCAACTTCTACTCGTACGGTTAAGGCATTAACTGAGGTTGAGTGTTTCGCCTTAATCGCTGACGAGCTAAAGTTTGTTGCTAGTCAGTTTAGGCGCCTTCATAGTAGACAGGTTCAACACACATTCCGGTTCTACTCACAGCAATGGAGGACTTGGGCTGCCTGCTTTATCCAAGCAGCATGGCGGCGATATTCTAAGAGGAAAGGAATGGAGCTTCGTCGAAAGGAAGAGCCTGAGGAGTCAGAAGGATCTCACAGTAATGCTAGTGGTGGTTCATACAGCATTGGTGCTACCTTCTTAGCTTCAAGGTTTGCTGCCAATGCTCTTCGGGGCATACATCGCAACGGGAACGCCAAGACTACGAGGGAGTTGGTGAAACTACAGAAACCTCCAGAACCTGACTTTAGTGCTGACGCAGATTAA 2157 0.4321 MKEKRASNIYRLDDLDSRLSSSFDTRIKKSGFIVEKLNHGSHASTATSRSFKRGMIKGSEGLKSIGRSLGFGVSKVVFPEDLKVSEKKIFDPQDKFLLLLNKLFVFSCILAVSLDPLFFYLPFINGLSNCLGIDQKMAIIVTALRTAVDVFYLIHMALQFRTAYIAPSSRVFGRGELVIDSTQIAKRYLRRYFIVDFLSVLPLPQIVVWRFLQKSKGLDVLATKQALLYIILLQYVPRLLRTVPLTSELKRTAGGFAETAWAGAAYYLMLYMLASHAVGAFWYLFAVERNDTCWQEACMQPGCKKDFLYCGNQWMEGYNDWNSTVLNDQCSSNDNSPFNFGIFKPALSSGIISSKQFVSKYFYCLWWGLQNLSTLGQGFQTSNYPWENIFSIALNTLGLILLALLIGNMQTYLQSITIRLEEMRVKRRDSEHWMHHRLLTPYLRGRVRRYDQYKWLATRGVDEESLVQTLPKDLRRDIKRHLCLALVTRVPLFESMDDRLLDAICERLKPCLFTENSYIVREGDPVEEMIFIIRGRLESVTTDGGRSGFFNCSLLQETDFCGEELLTWALDPRSGSNLPTSTRTVKALTEVECFALIADELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYSKRKGMELRRKEEPEESEGSHSNASGGSYSIGATFLASRFAANALRGIHRNGNAKTTRELVKLQKPPEPDFSADAD 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01224 718 CDD CAP_ED 492 623 IPR000595 -
Accr8g01224 718 Gene3D Helix hairpin bin 420 483 - -
Accr8g01224 718 MobiDBLite consensus disorder prediction 646 661 - -
Accr8g01224 718 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 81 713 - -
Accr8g01224 718 MobiDBLite consensus disorder prediction 697 718 - -
Accr8g01224 718 PRINTS EAG/ELK/ERG potassium channel family signature 455 462 IPR003938 GO:0005249|GO:0006813|GO:0016020
Accr8g01224 718 PRINTS EAG/ELK/ERG potassium channel family signature 273 283 IPR003938 GO:0005249|GO:0006813|GO:0016020
Accr8g01224 718 PRINTS EAG/ELK/ERG potassium channel family signature 387 398 IPR003938 GO:0005249|GO:0006813|GO:0016020
Accr8g01224 718 PRINTS EAG/ELK/ERG potassium channel family signature 156 165 IPR003938 GO:0005249|GO:0006813|GO:0016020
Accr8g01224 718 PRINTS EAG/ELK/ERG potassium channel family signature 361 378 IPR003938 GO:0005249|GO:0006813|GO:0016020
Accr8g01224 718 PRINTS EAG/ELK/ERG potassium channel family signature 405 414 IPR003938 GO:0005249|GO:0006813|GO:0016020
Accr8g01224 718 Gene3D Jelly Rolls 490 610 IPR014710 -
Accr8g01224 718 Pfam Cyclic nucleotide-binding domain 513 602 IPR000595 -
Accr8g01224 718 MobiDBLite consensus disorder prediction 646 667 - -
Accr8g01224 718 ProSiteProfiles IQ motif profile. 628 657 IPR000048 GO:0005515
Accr8g01224 718 Pfam Ion transport protein 100 418 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Accr8g01224 718 Gene3D - 103 417 - -
Accr8g01224 718 ProSiteProfiles cAMP/cGMP binding motif profile. 492 576 IPR000595 -
Accr8g01224 718 SUPERFAMILY cAMP-binding domain-like 421 611 IPR018490 -
Accr8g01224 718 SMART cnmp_10 492 623 IPR000595 -
Accr8g01224 718 SUPERFAMILY Voltage-gated potassium channels 92 414 - -
Accr8g01224 718 FunFam Cyclic nucleotide-gated ion channel 1 419 483 - -
Accr8g01224 718 FunFam Cyclic nucleotide-gated ion channel 1 490 608 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01224 Accr-Chr8 31009166 31015799 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01224 39 716 Ion Channels AT5G57940 76.934 0.0 1075
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01224 K05391 - gmx:100820202 1124.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g01224 8 31009166 31015799 Accr8g01224 8 31009166 31015799 ECH