Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01217 ATGGGTTTTGCAATATTTGGTTTTTGTTTGGTTCTGACGCTTTTCTTCGAGCATTTAGCATGCCAGCAACCAAATACAGATGGATTCTTTGTTTCTGAATTCTTGAAGAAGACAGTTTCTTCTTCTTCTTATTCAACTTTTTCCAAATCCTACAACTTGTCTGGTTCTTCTTTCTGTTCATGGCAGGGTGTTCTCTGTGATGCTCAAAAAGAACACATTGTTGAGTTCAAAGCTTCTGGCTTAGGCCTCTCTGGGCCTATTCCTGATAATACCATTGGCAAGCTCAACAAGCTTCAATCTTTGGATCTTAGCAGCAACAAAATCACTGGTTTGTCTTCAGATTTCTGGAGTTTAACTACTCTCAAGAGTCTTAACCTTTCTTCCAACCAGATTTCTGGCTCTTTGTCTAACAATATTGGCAATTTTGGTTCCTTGGAAGCCTTAGACTTATCGAACAACAATCTCTCTGAAGAAATTCCAGAAGCTACAGGCTCTCTTATCAGTCTTCGCATCCTCAACCTTAGCCGAAACCGATTCGAACAAACCATACCTTCTGGGATTTTAAAGTGTCTGTCTCTAGTCTCCATTGATCTTTCATCTAATCGTCTAAATGGGACTCTTCCAGAGGGTTTTGGTGCTTCTTTTCCAAAGCTTCAAATGTTGAACCTTGCAGGGAATAATATCCATGGTCAAGATTTTAACTTTTCTGGGTTGATTTCTATTACTACCCTCAATATGTCTGGAAATTTGTTTCAGGGTTCTGTAATGGGTGCATTTCAGGGAAGCTTGGAGGTCATTGATCTTAGCAAGAACCAATTTCAGGGTCATGTTTCTCAAGTGCAATTCGATTCTAACTTCAATTGGTCTCGTTTAGTTTTTCTGGATTTGTCTGAGAATCAGCTTAGTGGTGAACTTTTCCATAATTTGAATGAAGCCCAGAATCTGAAACACCTAAATCTTGCTCACAATAGATTTACCAGACAGACATTCCCACAGATTAAGATGCTGTCTTTGTTGGAATACTTGAACTTGTCTAGAACTAGTCTTGTTGGTCACATTCCACATGAAATCTCACAACTGAAGCATTTGAATGCTTTGGATATCTCTATGAATCATCTCATTGGGGAAATCCCATTTCTGAGCAATAAAAACTTCCAAATTCTTGACCTTTCTATGAACAATTTGAGTGGTGAAATAACCCAATCTCTCTTAGACAAGCTCCCAGGAATGGCCAAGTATAACTTCTCATATAACAACTTCACCTTTTGTGATTCAACATTTACCCCTGAAATTCTCAAGATGGCATTCTATGGATCAGTTAACAGTTGCCCAATTGCTGTAAACCCCACAATTTTAAGAAAAAGAGACACTGATCGAAACGGAATGAAGCTGGCTCTTGGATTGGCTCTAGCAATGATCTTCCTTCTTGCTGGGCTTTTATTTCTAGCATTTGGCTGTAGAAGGAAGACGAAAATGTGGGCAGTGAAGCAATCTTCTTACAAAGAAGAACAGAACATCTCAGGACCGTTTGAATTTCAGACTGATTCAACAACCTGGGTGGCTGATGTCAAGCAAGCATCTTTGGTCCCGGTAGTGATTTTCGAGAAGCCATTGTTGAACATCACATTCGCAGACCTCTTGTCTGCAACTTCAAACTTTGATAGAGGTACCCTTTTAGCTGAAGGGAAGTTTGGGCCTGTTTATAGAGGCTTTCTCCCTGGTGGGATTCATGTAGCAGTTAAGGTTCTGGTTGTTGGTTCTACATTAACAGATCAAGAAGCTGCAAGGGAGCTTGAGTACCTCGGTTGTATCAAGCATCCGAATCTTGTTCCTTTAACTGGTTATTGCCTAGCTGGAGATCAGAGGATTGCTATATATGAGTACATGGAAAATGGGAACCTGCAAAACTTGCTCCATGACTTGCCACTTGGGGTGCATAGTCCAGAAGATTGGAGCACAGACACATGGGAGGAAGATGACAATGGTGGTGGGATTCAAAATGCAGGCTCCGAGGGATTGCTCACATCTTGGAGATTTCGTCACAAGATTGCCCTTGGCACTGCTCGAGCACTGGCCTTTCTTCACCATGGCTGCTCACCTCCGATCATTCACAGAGATGTCAAGAATAGTAGTATTTATCTGGACTACAACCTAGAGCCAAGGTTGTCTGATTTTGGTCTAGCTAAGGTTTTTGGAGATGGCTTGGACGACGAAATTGTGCGGGGCTCGCCTGGTTATGTTCCACCTGAGTTTTCCCAACCTGAGCAGAACTCCCCAACACAGAAATCTGATGTGTACTGTTTTGGGGTTGTGCTATTTGAGCTGCTAACTGGTAAGAAACCTGTTGGGGATGATTATCATGATGAAAAGGGAGAAACTTTAGTTAGTTGGGTTAGAGGACTGGTGAGAAAAAATGAAGCTTCAAGAGCCATTGATTTGAAAATCCGCGAGACGGGTTCAGAAGAACAAATGGAGGAGGCCATCAAGATTGGTTATCTTTGCACGGCTGATCTTCCATTGAAGCGACCAAGCATGCAGCAAGTAGTTGGGCTGCTTAAAGATATTGAGCCTTCTGCAACTTAG 2583 0.417 MGFAIFGFCLVLTLFFEHLACQQPNTDGFFVSEFLKKTVSSSSYSTFSKSYNLSGSSFCSWQGVLCDAQKEHIVEFKASGLGLSGPIPDNTIGKLNKLQSLDLSSNKITGLSSDFWSLTTLKSLNLSSNQISGSLSNNIGNFGSLEALDLSNNNLSEEIPEATGSLISLRILNLSRNRFEQTIPSGILKCLSLVSIDLSSNRLNGTLPEGFGASFPKLQMLNLAGNNIHGQDFNFSGLISITTLNMSGNLFQGSVMGAFQGSLEVIDLSKNQFQGHVSQVQFDSNFNWSRLVFLDLSENQLSGELFHNLNEAQNLKHLNLAHNRFTRQTFPQIKMLSLLEYLNLSRTSLVGHIPHEISQLKHLNALDISMNHLIGEIPFLSNKNFQILDLSMNNLSGEITQSLLDKLPGMAKYNFSYNNFTFCDSTFTPEILKMAFYGSVNSCPIAVNPTILRKRDTDRNGMKLALGLALAMIFLLAGLLFLAFGCRRKTKMWAVKQSSYKEEQNISGPFEFQTDSTTWVADVKQASLVPVVIFEKPLLNITFADLLSATSNFDRGTLLAEGKFGPVYRGFLPGGIHVAVKVLVVGSTLTDQEAARELEYLGCIKHPNLVPLTGYCLAGDQRIAIYEYMENGNLQNLLHDLPLGVHSPEDWSTDTWEEDDNGGGIQNAGSEGLLTSWRFRHKIALGTARALAFLHHGCSPPIIHRDVKNSSIYLDYNLEPRLSDFGLAKVFGDGLDDEIVRGSPGYVPPEFSQPEQNSPTQKSDVYCFGVVLFELLTGKKPVGDDYHDEKGETLVSWVRGLVRKNEASRAIDLKIRETGSEEQMEEAIKIGYLCTADLPLKRPSMQQVVGLLKDIEPSAT 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01217 860 Gene3D Phosphorylase Kinase; domain 1 513 628 - -
Accr8g01217 860 FunFam Putative LRR receptor-like serine/threonine-protein kinase 514 628 - -
Accr8g01217 860 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 112 207 - -
Accr8g01217 860 Gene3D Ribonuclease Inhibitor 190 280 IPR032675 -
Accr8g01217 860 Pfam Leucine rich repeat 168 228 IPR001611 GO:0005515
Accr8g01217 860 Pfam Leucine rich repeat 87 131 IPR001611 GO:0005515
Accr8g01217 860 SUPERFAMILY Protein kinase-like (PK-like) 539 853 IPR011009 -
Accr8g01217 860 Gene3D Ribonuclease Inhibitor 33 189 IPR032675 -
Accr8g01217 860 SMART LRR_typ_2 336 360 IPR003591 -
Accr8g01217 860 SMART LRR_typ_2 142 165 IPR003591 -
Accr8g01217 860 SMART LRR_typ_2 238 261 IPR003591 -
Accr8g01217 860 SMART LRR_typ_2 95 117 IPR003591 -
Accr8g01217 860 SMART LRR_typ_2 166 190 IPR003591 -
Accr8g01217 860 SMART LRR_typ_2 118 141 IPR003591 -
Accr8g01217 860 PRINTS Leucine-rich repeat signature 98 111 - -
Accr8g01217 860 PRINTS Leucine-rich repeat signature 118 131 - -
Accr8g01217 860 Gene3D Transferase(Phosphotransferase) domain 1 629 860 - -
Accr8g01217 860 FunFam Calmodulin-binding receptor kinase CaMRLK 261 379 - -
Accr8g01217 860 SUPERFAMILY L domain-like 57 428 - -
Accr8g01217 860 Pfam Protein kinase domain 557 849 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01217 860 ProSiteProfiles Protein kinase domain profile. 553 859 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01217 860 Gene3D Ribonuclease Inhibitor 281 434 IPR032675 -
Accr8g01217 860 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 51 231 - -
Accr8g01217 860 ProSiteProfiles Leucine-rich repeat profile. 97 118 IPR001611 GO:0005515
Accr8g01217 860 ProSiteProfiles Leucine-rich repeat profile. 144 166 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01217 Accr-Chr8 30865338 30867920 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01217 69 855 Receptor kinase-like Gene Family AT5G07280 31.891 1.85e-108 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Accr8g01217 Pkinase 5.7e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01217 - - gmx:100797738 1268.45