Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01211 ATGACTTTGCTGCGCAAATTGTTCTTTCGTAAGCCCCCAGATGGGCTTCTTGAGATCTGTGAGAGAGTTTACGTTTTCGATTGCTGCTTCACGACGGATGCTTGGAATGAAGAAAACTATAAAGTGTACATTGACGGGATTGTCGCTCAACTTCGAGAGCACTTGCCTGATGCTTCGATCTTGGTCTTCAATTTCCGCCAGGAAGAAACCATCAGTCAAATGGCTAACATCTTGTCAGAGTATGACATGACTATTATGGACTACCCTCGGCAATATGAGGGCTGCCCAGTGCTCAAGATGGAGGTCATCCATCACTTTTTACGGTCGAGTGAAAGTTGGCTCTCACTTGGGCAGCATAATGTTCTGCTGATGCACTGTGAACGTGGTGGCTGGCCAGTTTTGGCTTTCATGCTGGCTGCACTTTTGATTTATAGAAAGCAATATAGTGGAGAACAAAGAACTTTGGATATGGTTTACAGGCAGGCTCCACGCGAGCTTTTGCAGTTTTTGTCTCCGTTAAATCCAATTCCTTCCCAACTGCGGTATCTGCAGTATATTTCGAGGAGGAATGTGGCCATAGAATGGCCTCCGTTGGACAGGGCGCTCACGTTGGACTGCATCATTCTCAGATGTTTTCCGAACTTTGACGGGGAAGGTGGATGTTGTCCAGTATTCCGAATTTATGGACAAGATCCTTTTCTTGCAGATAAAACTCCAAAAATCCTGTACTCAACTCAGAAGAAACACAAAACCGCCCGATTGTACAAGCAGCAAGAGTGTGAACTAATTAAAATTGACATCAACTGTCATATCCAAGGTGATGTTGTGATTGAAAGCATCAACTTGACCAGTGACATGGCCCATGAACGGATGATGTTCCGGGTCATGTTCAACACAGCTTTTATTAGGTCTAATATATTGATGCTTAACCGAGATGAAGTTGATGTTTTGTGGGATGCTAAAGATCATTTCCCCAAGGATTTCAGAGCGGAGATCCTTTTCTCAGAGATGGATGCCGCCGCCGCCGTTATTGCGGATGGTGCCTCATGCTTTGAGGAGAAGGAGGGACTGCCAGTGGAAGCATTTGTCAAAGTCCAGGAGATCTTTAACCATGTGGACTGGTTGAATCCTAAGGCTGATGTTGCACTAGATGTACTCCAACAAATTAGCGCTTCAGTGCATGACCAGTTGGATAGAATTTCTCATCAGCAGCATGATACTGGATCTTTGTTGCATGAAAAAGATCCTGAAGTGCCTCAGGGAAAAAAGAATGAAGCAACAAGATTATTGCCGTCAAAGAATGAATCCCCATATAGTGATCTGAGTAACAGAGTAGATGAACGTATCAAGACCGGTGCTTCTCCACAACTATGTGGAAGCGCTGACAGTATCTGTCAGAAGATGCCCATTACGTCTATGAGAACCTCAGAGTCCCATAAACATGAGACAAGTTCTACAAAGCTTGATGTAAAAGCACAGATGGATGATCTTGCCTTGTCTAGTTCTGCAGATGTTTCTAGTGAATCTTTTTCACCAAGAACACCTCCACATTATCCTTCCTTCATTAGAAAGTCTGATACATCACCCAACACACAGTTACCTTCTCGTCTTTCCCCTCTAGGACCAGGTTATCCTGTTACTGGAGAAATTGAAACCCAATCACAAGACAGAACTTCATCAATGGCTTCAACTCGGCAGTCTCCTTCCCCTTCAACCCCTCTGAAGGAGATTCTACCTGTTAGAACTATACTTGCTTCATCCGCTTCAGTACCTCCAGCACCACCCACACCCCCAACTCCTCCTCAAAAGGAGCATAAACTGGTTAGAGCTGTACCTCCCCCACCACCACCTCCTCCACCTCCACAGAAAGATAAATCACTGGTTAGAGTCATTCCTCCTCCACCCCCACCAAAGGAGGAACCAAGTCCTCCCCCCCAACCTCCTCCTTTAAAAGAGGAGCCTAAAGTTAAAACTGGACCACCACCCCCTCCACCACCAACTTTAAAGGTGGAGCCACCTGTTAGAGCTCAACCACCACCTCCTCCTCCTCCTCCAAATCTCCCTAGGAAAGCTGATTCTGCCACAGTATCACCGCTGCCACCTCCCCCTCCCTCTGCTTCAGAACTCTCCTCCAAGCACCCTAATCCTTCATTGCAGAATTCTAGATCTGTTCCTGCTGCTCCTAACGCTCCTCCACCTCCAGTTCCCATTAGTAAAGGAGATCTAAAATCAGGAGATGGAAATATTTCATCTAGTACCACAGTACCCCGAGGACGAATTCTATCTCGTACAATAAGCAGTACAAAAAATCAAAATAAAAAGCTGAAGCCATTGCATTGGCTGAAAATCTCTAGAGCAGTGCAAGGAAGTTTGTGGCATGAGGCAGCAAAATCTGGTGAAGCTTCTAAAGCCCCAGAGATTGATATGTCAGAGCTTGAGAATCTCTTTTCAGCAGCAGTCCCAAGTTCAGGCCCTGCCAAGAATTTAGGTGTGAAAAGCTCAGCAGGGCCTAAATCTGATAAAGTGCAACTGGTGGAGCACAGAAGAGCATATAATTGTGAAATCATGCTTTCAAAAGTGAAAGTCCCATTGCATGATTTGATGAGCTCAGTGCTAGCACTAGAGGATTCGGTACTAGATGTTGATCAGGTTGAAAACCTTGTAAAGTTTTGTCCCACAAAAGAGGAGATGGAATTACTCAAGGGTTATACTGGAGAAGAGGAGAAATTAGGGAGATGTGAACAGTTCTTCCTAGAGTTGATGAAAGTACCACGGGTAGAGTCCAAACTCAGAGTGTTTTCATTCAAGATTCAGTTCCACTCTCAGGTTTCTGATCTTAGAAAAAGCCTGAATATTGTAGATGCTACTGTAGAAGAGATTAGGAATTCTGTCAAATTGAAGAGAATTATGCAAACAATACTCTCTTTGGGAAATGCTTTGAACCAAGGAACTGCTCGAGGTTCTGCTATTGGATTCAGATTGGATAGCCTTCTTAAACTCACTGAGACGCGAGCACGGAACAACAAGATGACTCTCATGCATTATCTTTGTAAGGTGTTGGCTGACAAATTACCAGAAGTTCTAGACTTCTCCAAGGATCTTGCTAACCTAGAGCCTGCTGGAAAGATCCAATTGAAGTTTTTGGCAGAGGAGATGCAAGCTATAAGCAAAGGATTAGAGAGAGTTATCCAGGAACTCTCAATCTCTGAAAATGATGGTCCGGTATCTGAGACATTCTGCAAGACTTTGAAAGTTTTCCTCCGTTCCGCTGAGGCTGAAGTCCGATCACTGACTTCATTATATTCTGGCGTGGGTAGGAAAGTGGACGCGTTGATCTTTTATTTTGGTGAAGATCCAGCTCGCTGCCCTTTTGAGCAAGTTGTGTCAACTTTGCTGAACTTCACAAGGATGTTCCACAAAGCCCATGAAGAAAACTGCAAGCAGCTTGAGCTTGAAGTGAAGAAATCATCTGATAGTGAGAAAAAGACGTGTGAATCACAAAGGATACTGCCTTCAGCAATCCGGACCGGCAACGTCAAGTGA 3543 0.4465 MTLLRKLFFRKPPDGLLEICERVYVFDCCFTTDAWNEENYKVYIDGIVAQLREHLPDASILVFNFRQEETISQMANILSEYDMTIMDYPRQYEGCPVLKMEVIHHFLRSSESWLSLGQHNVLLMHCERGGWPVLAFMLAALLIYRKQYSGEQRTLDMVYRQAPRELLQFLSPLNPIPSQLRYLQYISRRNVAIEWPPLDRALTLDCIILRCFPNFDGEGGCCPVFRIYGQDPFLADKTPKILYSTQKKHKTARLYKQQECELIKIDINCHIQGDVVIESINLTSDMAHERMMFRVMFNTAFIRSNILMLNRDEVDVLWDAKDHFPKDFRAEILFSEMDAAAAVIADGASCFEEKEGLPVEAFVKVQEIFNHVDWLNPKADVALDVLQQISASVHDQLDRISHQQHDTGSLLHEKDPEVPQGKKNEATRLLPSKNESPYSDLSNRVDERIKTGASPQLCGSADSICQKMPITSMRTSESHKHETSSTKLDVKAQMDDLALSSSADVSSESFSPRTPPHYPSFIRKSDTSPNTQLPSRLSPLGPGYPVTGEIETQSQDRTSSMASTRQSPSPSTPLKEILPVRTILASSASVPPAPPTPPTPPQKEHKLVRAVPPPPPPPPPPQKDKSLVRVIPPPPPPKEEPSPPPQPPPLKEEPKVKTGPPPPPPPTLKVEPPVRAQPPPPPPPPNLPRKADSATVSPLPPPPPSASELSSKHPNPSLQNSRSVPAAPNAPPPPVPISKGDLKSGDGNISSSTTVPRGRILSRTISSTKNQNKKLKPLHWLKISRAVQGSLWHEAAKSGEASKAPEIDMSELENLFSAAVPSSGPAKNLGVKSSAGPKSDKVQLVEHRRAYNCEIMLSKVKVPLHDLMSSVLALEDSVLDVDQVENLVKFCPTKEEMELLKGYTGEEEKLGRCEQFFLELMKVPRVESKLRVFSFKIQFHSQVSDLRKSLNIVDATVEEIRNSVKLKRIMQTILSLGNALNQGTARGSAIGFRLDSLLKLTETRARNNKMTLMHYLCKVLADKLPEVLDFSKDLANLEPAGKIQLKFLAEEMQAISKGLERVIQELSISENDGPVSETFCKTLKVFLRSAEAEVRSLTSLYSGVGRKVDALIFYFGEDPARCPFEQVVSTLLNFTRMFHKAHEENCKQLELEVKKSSDSEKKTCESQRILPSAIRTGNVK 1180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01211 1180 MobiDBLite consensus disorder prediction 744 772 - -
Accr8g01211 1180 Coils Coil 1139 1159 - -
Accr8g01211 1180 MobiDBLite consensus disorder prediction 471 772 - -
Accr8g01211 1180 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 337 IPR035892 -
Accr8g01211 1180 MobiDBLite consensus disorder prediction 474 489 - -
Accr8g01211 1180 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 12 187 IPR029021 -
Accr8g01211 1180 SMART it6_source 765 1180 IPR015425 -
Accr8g01211 1180 MobiDBLite consensus disorder prediction 402 422 - -
Accr8g01211 1180 Pfam C2 domain of PTEN tumour-suppressor protein 200 336 IPR014020 -
Accr8g01211 1180 Gene3D - 196 340 - -
Accr8g01211 1180 MobiDBLite consensus disorder prediction 499 514 - -
Accr8g01211 1180 MobiDBLite consensus disorder prediction 710 725 - -
Accr8g01211 1180 SUPERFAMILY Formin homology 2 domain (FH2 domain) 840 1155 - -
Accr8g01211 1180 MobiDBLite consensus disorder prediction 590 709 - -
Accr8g01211 1180 Gene3D Protein tyrosine phosphatase superfamily 14 191 IPR029021 -
Accr8g01211 1180 ProSiteProfiles C2 tensin-type domain profile. 199 337 IPR014020 -
Accr8g01211 1180 Pfam Formin Homology 2 Domain 767 1138 IPR015425 -
Accr8g01211 1180 SMART PTEN_C2_2 197 336 IPR014020 -
Accr8g01211 1180 MobiDBLite consensus disorder prediction 402 441 - -
Accr8g01211 1180 MobiDBLite consensus disorder prediction 548 573 - -
Accr8g01211 1180 ProSiteProfiles Formin homology-2 (FH2) domain profile. 765 1164 IPR015425 -
Accr8g01211 1180 Gene3D Formin, FH2 domain 762 1149 IPR042201 -
Accr8g01211 1180 PANTHER FORMIN-J 1 666 - -
Accr8g01211 1180 MobiDBLite consensus disorder prediction 521 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01211 Accr-Chr8 30735350 30745351 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01211 1 398 Protein tyrosine phosphatase (PTP) family AT5G58160 68.329 0.0 605
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01211 - - aprc:113848377 1544.25