Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01209 ATGGGTGAAAAATCCAAAGATTCTTCCTCGTTGCTTCACGGGAAGTACGAGCTCGGTCGTCTTCTGGGTCACGGCACTTTCGCCAAGGTGTACCATGCCAAGAACTTGCAGAGCGGGAAGAGCGTGGCTCTGAAGGTGGTCGGCAAGGAGAAAGTGATCAAAGTGGGCATGATGGAGCAAATGAAGAGGGAGATTTCTGTGATGAAGATGGTGGAGCATCCCAACATCGTTGAGCTTTATGAGGTTATGGCGAGCAAATCCAAGATCTACATCGCTATGGAGCTCGTCCGTGGCGGCGAGCTCTTCAACAAGATCGCCAGAGGCCGCCTGAGGGAAGACGTCGCACGAGTCTATTTCCAGCAATTGATCTCCGCCATCGATTTCTGCCACAGTCGCGGCGTTTACCACCGCGATCTGAAGCCGGAGAATCTGCTTCTGGACGAGGATGGGAATTTGAAGGTAACCGATTTTGGCCTGAGCACTTTCGCTGAGCACTTGCGGCAAGACGGGTTGCTTCACACCACTTGTGGTACTCCGGCGTACGTGGCGCCGGAGGTAATCGGTAGGAAGGGGTACGACGGCGATAAGGCCGATATCTGGTCTTGTGGGGTCATACTGTATGTGCTTCTCGCCGGATTTTTGCCTTTCCAGGATGACAACTTGATGGCTATGTACAAGAAAATCTACCGGGGAGACTTCAAATGCCCGCCGTGGTTCTCCTCCGACGCTCGCCGGCTGATAACGAAGCTCCTCGACCCGAACCCGAGTACCCGAATCACAATTTCCAAAATCATGGATTCGCCCTGGTTCAAAAAAACCATCCCCAAGAGCGTGGTGACGAAGGAGGAACAGGAATTCGATTTTGACAACGACAAATCAAAGCAGCAAGCACCGGCGACAATGAACGCGTTTCACATAATATCATTATCTCAAGGGTTCGATTTGTCTCCGTTGTTCGAAGAGAAGAAGAGGGAGGAGAAGGAGGAGCTGAGATTCGCGACGACAAGGCCGGCGAGTAGCGTTATATCGAAGCTTGAAGAGGTGGCGAAGGCGGAGAAGTTCAACGTGAAGAAGAGCGACACAAGAGTGAGGTTGCAGAGACAAGAATGTGGAAGAAAAGGGAAGCTGGCGATTGCGGCGGACATATACGCCGTGACGCCGTCGTTTCTGGTGGTGGAGGTGAAGAAGGACAACGGTGACACCTTAGAGTACAACCAATTCTGCAGCAAAGAGCTCCGCCCTGCGCTTAAAGACATCCTCTGGACTTCGCCGCCGGATAGCTCCACGCCGGCTTGA 1296 0.5278 MGEKSKDSSSLLHGKYELGRLLGHGTFAKVYHAKNLQSGKSVALKVVGKEKVIKVGMMEQMKREISVMKMVEHPNIVELYEVMASKSKIYIAMELVRGGELFNKIARGRLREDVARVYFQQLISAIDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSTFAEHLRQDGLLHTTCGTPAYVAPEVIGRKGYDGDKADIWSCGVILYVLLAGFLPFQDDNLMAMYKKIYRGDFKCPPWFSSDARRLITKLLDPNPSTRITISKIMDSPWFKKTIPKSVVTKEEQEFDFDNDKSKQQAPATMNAFHIISLSQGFDLSPLFEEKKREEKEELRFATTRPASSVISKLEEVAKAEKFNVKKSDTRVRLQRQECGRKGKLAIAADIYAVTPSFLVVEVKKDNGDTLEYNQFCSKELRPALKDILWTSPPDSSTPA 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01209 431 Pfam NAF domain 298 358 IPR004041 GO:0007165
Accr8g01209 431 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 6 418 - -
Accr8g01209 431 FunFam Non-specific serine/threonine protein kinase 6 297 - -
Accr8g01209 431 ProSitePatterns Protein kinases ATP-binding region signature. 22 49 IPR017441 GO:0005524
Accr8g01209 431 Pfam Protein kinase domain 16 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01209 431 ProSiteProfiles Protein kinase domain profile. 16 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01209 431 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Accr8g01209 431 SUPERFAMILY Protein kinase-like (PK-like) 13 289 IPR011009 -
Accr8g01209 431 CDD CIPK_C 302 417 - -
Accr8g01209 431 FunFam Non-specific serine/threonine protein kinase 296 421 - -
Accr8g01209 431 ProSiteProfiles NAF domain profile. 296 320 IPR018451 GO:0007165
Accr8g01209 431 Gene3D Kinase associated domain 1, KA1 295 422 - -
Accr8g01209 431 Gene3D Phosphorylase Kinase; domain 1 5 95 - -
Accr8g01209 431 SMART serkin_6 16 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01209 431 Gene3D Transferase(Phosphotransferase) domain 1 96 276 - -
Accr8g01209 431 CDD STKc_SnRK3 15 269 - -
Accr8g01209 431 FunFam Non-specific serine/threonine protein kinase 7 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01209 Accr-Chr8 30675043 30676338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01209 2 425 CBL-interacting serine-threonine protein kinases AT4G30960 75.926 0.0 655
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Accr8g01209 Pkinase 3.7e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01209 - K07198 qsa:O6P43_002997 757.288