Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01201 ATGCAGCCTTGTAGCAGAGAAATGCAAGGAATAAACCCTCTCTCGAACTCTTCTTCTCAGATTCCTCTCTCCGGCCACCACCAGATCCAAAATTCTCAGATGCATCACTTCGACCCTTCTTCTTCCCACGACGATTTCCTCGACCAAATGCTCTCCAACCTTCTATCTTCCTCTTGGTTGGACCTTAACCCCAAGCCCTTCTGGGACGATACGCCCCCACCGCCTTCCCATGCCGCCGCCGAGAATGTTGCGTTTCAGTACGATGACCAAGCCAGCTTGGCTTCCAAGTTCCGAAACCACCAGATCAGTAGTGACGGCGGTAACCCTTCTACCAAGTCGTCGACGACGACAGCGGCTCTGATGCTCCAGGCTCAGCATCAGCTTCTGATGTCTCGAGGTCTCGCCGGAGCCGGTGACTCAGGCCTCCTTCCGATGCCGTTGTCGTTGGGCGGCGGCGGAGATGTTGACCGCTCCAGAAACGACGTCGTTGACGGGTCTTCGTTCAAATCTCCTAATCCGGGTGGTGAGAGGTCAGTTCAAGCCCTGTATAACGGATTCGCCGGTTCTCTGCATGGCGGTGGTCAAGTTCCGAATCAGACGCAGCAATTTCTTCATCCACAGGGCCAGAATCTTGGTGGTTCATCAGGCGTCGCAACGACCCAAACTCCGGCGAGCAGTACTCCTGCACAACCGAGGCAGAGAGTTAGGGCAAGGAGAGGTCAAGCCACGGACCCACACAGCATCGCAGAGAGGTTACGAAGGGAGAAAATCGCAGAGAGAATGAAGGCGCTGCAGGAGCTAGTTCCCAATGCTAACAAGACAGACAAGGCGTCGATGCTGGATGAGATCATCGACTATGTGAAGTTCCTACAGCTTCAAGTTAAGGTATTGAGTATGAGCAGGTTGGGCGGTGCTGCTGCGGTGGCTCCCCTTGTTGCTGATATGGCCTCTGAGGCAGGCGCTGTGGCAGCTGCTGTAGCAGGAGGCGACTGCGTTCAGGCCACGGCCAGCGGCAACCAGACGCCGCCATCAACCTCCAACGACACCATCGCCATGACGGAGCATCAGGTGGCCAAGCTCATGGAGGAGGACATGGGCTCCGCCATGCAGTACCTGCAGGGCAAGGGGCTCTGCCTCATGCCAATCTCCCTCGCCACCGCTATCTCCACTGCCACCTGTCATTCCCGTAGCCACCTCGTCAACAACCACAACCAGAAAGGGCCGTCGTCTCCCAGCATGTCGGTCTTGACCGTGCAGTCAGCGACGGCAGGTAACGGCGCCGCCGAGAGCTCCGTCAAAGAGGGGGTATCTGTTTCGAAGCCGTGA 1326 0.5701 MQPCSREMQGINPLSNSSSQIPLSGHHQIQNSQMHHFDPSSSHDDFLDQMLSNLLSSSWLDLNPKPFWDDTPPPPSHAAAENVAFQYDDQASLASKFRNHQISSDGGNPSTKSSTTTAALMLQAQHQLLMSRGLAGAGDSGLLPMPLSLGGGGDVDRSRNDVVDGSSFKSPNPGGERSVQALYNGFAGSLHGGGQVPNQTQQFLHPQGQNLGGSSGVATTQTPASSTPAQPRQRVRARRGQATDPHSIAERLRREKIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADMASEAGAVAAAVAGGDCVQATASGNQTPPSTSNDTIAMTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTATCHSRSHLVNNHNQKGPSSPSMSVLTVQSATAGNGAAESSVKEGVSVSKP 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01201 441 MobiDBLite consensus disorder prediction 1 26 - -
Accr8g01201 441 MobiDBLite consensus disorder prediction 399 441 - -
Accr8g01201 441 Pfam Helix-loop-helix DNA-binding domain 246 291 IPR011598 GO:0046983
Accr8g01201 441 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 239 301 IPR036638 GO:0046983
Accr8g01201 441 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 241 290 IPR011598 GO:0046983
Accr8g01201 441 MobiDBLite consensus disorder prediction 193 232 - -
Accr8g01201 441 FunFam Transcription factor bHLH66 238 303 - -
Accr8g01201 441 MobiDBLite consensus disorder prediction 148 245 - -
Accr8g01201 441 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 50 388 - -
Accr8g01201 441 Gene3D - 238 305 IPR036638 GO:0046983
Accr8g01201 441 SMART finulus 247 296 IPR011598 GO:0046983
Accr8g01201 441 MobiDBLite consensus disorder prediction 399 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01201 Accr-Chr8 30437899 30440900 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01201 228 440 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 65.066 5.46e-92 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr8g01201 HLH 2e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01201 - - cave:132185902 471.855