Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01154 ATGCTTACTTTCTCGGTATCTTCTTGTAAAGCAAATGAAGAAGCTGCAGAATATTTGAATGGTAACGCTCCAGATGTTAAAGTCTTTTCTCTATTTGAGATTGACAGTGCCACAAATAGATTCTCAACTGAAAATAAGATTGGAGAAGGTGGTTTTGGAGTTGTTTACAAGGGTATATTACCTAACGGTGAGGAAATAGCAGTGAAAAGGCGTTCAGAAGGTTCCAGGCAAGGATTTACGGAATTCAAAAATGAGACAATACTTAATGCAAGACTGCAGCATGTCAATCTTGTTCGACTATTGGGGTTCTGCAATGACAAGGAGGAACAAATGTTGGTCTATGAGTACATGCCAAACAAAAGTCTTGACTTTTATCTCTTTGACCCTATAAAGCAACATCTACTAGATTGGAAACAACGTGTCTGTATCATCGAAGGAGTTACTCAAGGGCTTATCTACCTTCAAGAATATTCTAGGTTGACAATAATTCATAGGGACTTAAAAGCGAGCAATATTTTATTGGATCATGAGATGAAGCCAAAGATTTCAGACTTTGGCATGGCAAGATCATTCAAAAAAGATGAACATGAAGAAAGAGCCAGCAAACTTGTAGGGACATACGGCTACATACCTCCTGAATATGTTGAGAAAGGATTGTGTTCCATTAAATCTGATGTTTATAGCTTTGGTATCGTCCTCCTACAAATTATTAGTGGTAAAAAGATCTCAAGCTTATATGGAGAGAACAATGATTTGAACCTCTTAGAATATGCTTATATCCTATGGAAAGAAGGAAAAGGCATGGAATTCATGGACGCTTCACTTGATGACACATCCTCTCCATGCAAATTGATGAGATGCTTGCAAATTGCTCTTCTGTGTGTCCAGAAAAATGCAAAAGACAGGCCAAGCATGCTAGAAGTAGGCTTGATGCTCAGAAACAAAAGCAACTTCATGGCGATCCCAAAACAGCCAGCATATTCAAAGGTAGGAAATGAAGAGGTGGTGGAGTCTAGTCAACATCCAAAAAGTTGTTCACGAAATGAAACAACAATGTCTCCAGTTTGGGGTCGATAG 1077 0.3853 MLTFSVSSCKANEEAAEYLNGNAPDVKVFSLFEIDSATNRFSTENKIGEGGFGVVYKGILPNGEEIAVKRRSEGSRQGFTEFKNETILNARLQHVNLVRLLGFCNDKEEQMLVYEYMPNKSLDFYLFDPIKQHLLDWKQRVCIIEGVTQGLIYLQEYSRLTIIHRDLKASNILLDHEMKPKISDFGMARSFKKDEHEERASKLVGTYGYIPPEYVEKGLCSIKSDVYSFGIVLLQIISGKKISSLYGENNDLNLLEYAYILWKEGKGMEFMDASLDDTSSPCKLMRCLQIALLCVQKNAKDRPSMLEVGLMLRNKSNFMAIPKQPAYSKVGNEEVVESSQHPKSCSRNETTMSPVWGR 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01154 358 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 18 353 - -
Accr8g01154 358 SMART serkin_6 41 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01154 358 Pfam Protein kinase domain 42 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01154 358 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 117 320 - -
Accr8g01154 358 ProSiteProfiles Protein kinase domain profile. 41 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01154 358 Gene3D Phosphorylase Kinase; domain 1 4 116 - -
Accr8g01154 358 MobiDBLite consensus disorder prediction 338 358 - -
Accr8g01154 358 SUPERFAMILY Protein kinase-like (PK-like) 24 330 IPR011009 -
Accr8g01154 358 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Accr8g01154 358 Gene3D Transferase(Phosphotransferase) domain 1 117 327 - -
Accr8g01154 358 ProSitePatterns Protein kinases ATP-binding region signature. 47 69 IPR017441 GO:0005524
Accr8g01154 358 FunFam Uncharacterized protein 17 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01154 Accr-Chr8 29569934 29572194 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01154 23 327 Receptor kinase-like Gene Family AT4G11480 51.634 6.06e-113 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr8g01154 Pkinase 6.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01154 - - pcin:129297403 612.838