Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01151 ATGCTAACTTTCTCGGTATCTTCTTGTAAAGCAAATGAAGAAGCTGCAGAATATCTGAATGGTACTACTCCAAACGTTAAAGTCTTTTCTTTCTCTGAGATTGAAAGTGCCACAAATAGATTCTCAACTGAAAATAAGATTGGAGAAGGAGGTTTTGGAGTTGTTTACAAGGGTATATTACCTATTGGTGAGGAAATAGCAGTGAAAAGGCATTCAGAAGGTTCCAGGCAAGGATTTCAGGAATTCAAAAATGAGACAATACTCAATGCAAGACTGCAGCATGTCAATCTTGTTCGACTGTTGGGGTTCTGCAATGACAAGGAGGAACAAATGTTGGTCTATGAGTACATGCCAAACAAAAGTCTTGACTTTTATCTCTTTGACCCTACAAGGCAACATCTACTAGATTGGAAACAACGTGTTTGTATCATCGAAGGAGTTGCTCAAGGGCTTATCTACCTTCAAGAATATTCTAGGTTGACAATAATTCATAGGGACTTGAAAGCGAGCAATATTTTATTGGATCATGAGATGAAGCCAAAGATTTCAGACTTTGGCATGGCAAGATCATTCAAAAAAGATGAACATGAAGAAAGAGCCAGCAAACTTGTAGGGACATACGGCTACATACCTCCTGAATATGTTGAGAAAGGATTGTGTTCCATTAAATCTGATGTTTATAGCTTTGGTATCGTCCTCCTACAAATTCTTAGTGGTAAACGGATCGCAAACTTATACGGAGAGAACAATGATTTGAACCTCTTAGAATATGCTTATGTCCTATGGAAAGAAGGAAAAGGCATGGAATTCATGGACTCTTCACTTGATGACACATCCTCTCCAAGCAAATTGATGAGATGCTTGCAAATTGCTCTTCTTTGTGTCCAGAAAAATGCAGAAGACAGGCCAAGCATGTTAGAAGTAGGCTTAATGCTCAGAGACAAAAGCAACTTAATGGCGATCCCAAAACAGCCAGCATATTCAAGGGTAGCAAATGAAGAGGCGGTGGAGTTTAGTCAACATCCAGAAAGTTGTTCACGAAATGAAATAACAATGTCTCCAGTTTGTGGTCGATAG 1077 0.39 MLTFSVSSCKANEEAAEYLNGTTPNVKVFSFSEIESATNRFSTENKIGEGGFGVVYKGILPIGEEIAVKRHSEGSRQGFQEFKNETILNARLQHVNLVRLLGFCNDKEEQMLVYEYMPNKSLDFYLFDPTRQHLLDWKQRVCIIEGVAQGLIYLQEYSRLTIIHRDLKASNILLDHEMKPKISDFGMARSFKKDEHEERASKLVGTYGYIPPEYVEKGLCSIKSDVYSFGIVLLQILSGKRIANLYGENNDLNLLEYAYVLWKEGKGMEFMDSSLDDTSSPSKLMRCLQIALLCVQKNAEDRPSMLEVGLMLRDKSNLMAIPKQPAYSRVANEEAVEFSQHPESCSRNEITMSPVCGR 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01151 358 Pfam Protein tyrosine and serine/threonine kinase 43 308 IPR001245 GO:0004672|GO:0006468
Accr8g01151 358 SMART serkin_6 41 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01151 358 SUPERFAMILY Protein kinase-like (PK-like) 23 333 IPR011009 -
Accr8g01151 358 CDD STKc_IRAK 47 312 - -
Accr8g01151 358 FunFam Uncharacterized protein 17 116 - -
Accr8g01151 358 Gene3D Phosphorylase Kinase; domain 1 3 116 - -
Accr8g01151 358 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 117 320 - -
Accr8g01151 358 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 20 353 - -
Accr8g01151 358 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Accr8g01151 358 ProSitePatterns Protein kinases ATP-binding region signature. 47 69 IPR017441 GO:0005524
Accr8g01151 358 Gene3D Transferase(Phosphotransferase) domain 1 117 329 - -
Accr8g01151 358 ProSiteProfiles Protein kinase domain profile. 41 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01151 Accr-Chr8 29544849 29552168 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01151 22 327 Receptor kinase-like Gene Family AT4G11480 50.814 6.39e-113 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr8g01151 PK_Tyr_Ser-Thr 9.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01151 - - pcin:129297403 598.586