Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Accr8g01141 | ATGTCTGGTTTGCTTCTTGTAGTTGAATATGCTCGAAGGAGAGGCTTCCATCAGAGCGGGGCGTCCTCTGGATGCACGAATTTCACCCGACGATCTTCCCTCGGTTTATATTCGAGCAATCACGAATTCCTTCCTTCCTCTTCTTCTCTCCAGCAAAGAAGCGCGCGCTCAGATGACAGCCCTGCAGGAGCAGCCGGGGAAGCCAAAGAAAGATTGGATGCGAAATTAAGATCAGCTCAAATGAACTCAGCTATCGAAAGGCAAAACATCAAAGAGAAGAAGAAAAGCAGAGAAGGAAGACCAGAGTTACACCTAGAGGTATACGGATCAAAGAAAAGTAGGATGATGTTCAATTGGAGGAAACTGCACTGGAAGGCTTCAGATCAAGAGGATTGTGCTGTGTGCTTGGAGTCATTCAAGGTTGGGGATACACTGATCCGTCTTCCTTGTACTCACAAGTTCCATTGCAGCTGCTTGGAGCCATGGTTACAAAATAATAGTTATTGCCCATGTTGCAGAGCTTCCATTATTATCGCTCATTAG | 543 | 0.4604 | MSGLLLVVEYARRRGFHQSGASSGCTNFTRRSSLGLYSSNHEFLPSSSSLQQRSARSDDSPAGAAGEAKERLDAKLRSAQMNSAIERQNIKEKKKSREGRPELHLEVYGSKKSRMMFNWRKLHWKASDQEDCAVCLESFKVGDTLIRLPCTHKFHCSCLEPWLQNNSYCPCCRASIIIAH | 180 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Accr8g01141 | 180 | SMART | ring_2 | 132 | 172 | IPR001841 | - | |
Accr8g01141 | 180 | MobiDBLite | consensus disorder prediction | 43 | 58 | - | - | |
Accr8g01141 | 180 | Pfam | Ring finger domain | 131 | 173 | IPR001841 | - | |
Accr8g01141 | 180 | PANTHER | RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING | 42 | 173 | - | - | |
Accr8g01141 | 180 | SUPERFAMILY | RING/U-box | 120 | 178 | - | - | |
Accr8g01141 | 180 | ProSiteProfiles | Zinc finger RING-type profile. | 132 | 173 | IPR001841 | - | |
Accr8g01141 | 180 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 112 | 178 | IPR013083 | - | |
Accr8g01141 | 180 | MobiDBLite | consensus disorder prediction | 43 | 70 | - | - | |
Accr8g01141 | 180 | CDD | RING-H2_PA-TM-RING | 131 | 173 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Accr8g01141 | Accr-Chr8 | 29455225 | 29456449 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Accr8g01141 | 127 | 176 | C3H Transcription Factor Family | AT1G49850 | 62.000 | 4.12e-17 | 74.7 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Accr8g01141 | - | - | tcc:18588906 | 183.341 |