Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01138 ATGTGTGTGCAGGACGCAGAGCAAGTTGGTGAACAAAATATAGATATGGAGACCCGTGAGAGCAGAAGCAAGACATGGCCTTTGCATTGTGATTTCTTGCGTACCCAGATGGAGAACTGGGAAAAGGGGCCTCCTTTAACAACTTCCAGTGTTGGAAATTCATTTCCTCTGGAAAGCATAGGTGAGCATGCTGTGGTCGGAGACAGAAAACAGACATTGATGAACTTTGTCCCTGTTCTTCGGTCCGGTGAGTGGTCAGATATTGGAGAACGTACTTATATGGAGGACACTCACATATGTGTTGAAGACATGGCAAAGGAATTTGGGTATAAAGTTATCAGTGAGGAAGCAGTTTCCTTTTATGGAGTATTTGACGGACATGGTGGTGAGAATGCTGCGAAATTCGTCCGTGATTATCTGCCAGAAGTGATTGTAAAAGATGCTGACTTTCCCTTGGAGATGGAGAAGGTGGTCACAAGGTCATTCTTGGAGACTGATACTGCTTTTGCAAAGTTTTGTTCTCTCGAGTCTTCCATGTCTTCTGGTACAACTGCACTAACCGCCATTATACATGGAAGGTCTTTGCTTGTAGCCAATGCCGGAGACTGCAGGGCAGTGTTGTCCCGGTGTGGAGTTGCCATAGAAATGTCCAAAGATCACAGACCCTCATGCACCAAAGAAAAGAAGAGGATTGCATCCTTGGGTGGATTCATTGATGATGGTTACCTGAATGGCCAACTCGGTGTCACACGGGCTCTAGGCAACTGGCACCTCGAAGGAATGAAGGAAATGAACGAAAGAGGGCAAGGAGGGCCATTAACTGCTGAGCCAGAACTTAAACTGATGACACTAACCAAAGAAGATGAGTTCTTGATAATTGGGAGTGATGGAATCTGGGATGTATTCACAAGCCAAAATGCAATCGATTTTGCGAGGAGGCGGCTTCGAAAGCACAATGACTTGAAACTGTGCTGCAAGGAAATGGTAGGGGAAGCCATAAAGAGAGGATCAAAAGACAACTTAACTGTTGTGATGGTCTGTTTCCACTCAGATCCGCCGCCACCCGTAGTGGTAGAAAGGTTGAGAGTCAGGCGAAGCATTTCAGCGGAGGGACTTCAGAATCTAAGATCTCTGTTAGATGGATTAGAAGAATAA 1155 0.4571 MCVQDAEQVGEQNIDMETRESRSKTWPLHCDFLRTQMENWEKGPPLTTSSVGNSFPLESIGEHAVVGDRKQTLMNFVPVLRSGEWSDIGERTYMEDTHICVEDMAKEFGYKVISEEAVSFYGVFDGHGGENAAKFVRDYLPEVIVKDADFPLEMEKVVTRSFLETDTAFAKFCSLESSMSSGTTALTAIIHGRSLLVANAGDCRAVLSRCGVAIEMSKDHRPSCTKEKKRIASLGGFIDDGYLNGQLGVTRALGNWHLEGMKEMNERGQGGPLTAEPELKLMTLTKEDEFLIIGSDGIWDVFTSQNAIDFARRRLRKHNDLKLCCKEMVGEAIKRGSKDNLTVVMVCFHSDPPPPVVVERLRVRRSISAEGLQNLRSLLDGLEE 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01138 384 ProSitePatterns PPM-type phosphatase domain signature. 120 128 IPR000222 GO:0043169
Accr8g01138 384 CDD PP2Cc 81 348 IPR001932 -
Accr8g01138 384 MobiDBLite consensus disorder prediction 1 20 - -
Accr8g01138 384 FunFam Probable protein phosphatase 2C 22 66 351 - -
Accr8g01138 384 SMART PP2C_4 71 346 IPR001932 -
Accr8g01138 384 Pfam Protein phosphatase 2C 91 340 IPR001932 -
Accr8g01138 384 ProSiteProfiles PPM-type phosphatase domain profile. 81 348 IPR001932 -
Accr8g01138 384 PANTHER PROTEIN PHOSPHATASE 2C 68 346 IPR015655 GO:0004722|GO:0006470
Accr8g01138 384 SUPERFAMILY PP2C-like 71 349 IPR036457 -
Accr8g01138 384 Gene3D - 68 351 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01138 Accr-Chr8 29416212 29420226 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01138 76 382 PP2C-type Phosphatase Gene Family AT2G25620 59.935 4.69e-135 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Accr8g01138 PP2C 5.1e-66 CL0238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01138 K14803 - gmx:100820303 559.681