Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01128 ATGGATAAATCTGGCGGCGGGATGGCGTCCAATAAGGACGCAGAGGGTGGTGGTGTCAGGTACCGGGGAGTGAGGAGGCGGCCATGGGGGAAGTTCGCGGCGGAGATACGGGACTCGACGAACCAAGGGCAGAGGGTGTGGCTGGGGACTTTTGACACGGCGGAGGAAGCGGCGAGAGCGTACGACAGAGCCGCTTACAACATGAGAGGCTCATTCGCAATCCTCAACTTCCCCAATGAATACCCTCTCACAGCTAATCGTTCTAACAACACTGCGGCGTCGTCGTCGTCGTCGTCATCAGCTGCTTCTTCTTCGAGGAACCGCCCTGAAGTGTTCGAGTTCGAGTACCTGGATGATAAACTGCTGGAGGAGCTTCTGGACTATGATGACAAGAAGAAGAACGGGAAGTGA 411 0.562 MDKSGGGMASNKDAEGGGVRYRGVRRRPWGKFAAEIRDSTNQGQRVWLGTFDTAEEAARAYDRAAYNMRGSFAILNFPNEYPLTANRSNNTAASSSSSSSAASSSRNRPEVFEFEYLDDKLLEELLDYDDKKKNGK 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01128 136 PRINTS Ethylene responsive element binding protein signature 44 60 IPR001471 GO:0003700|GO:0006355
Accr8g01128 136 PRINTS Ethylene responsive element binding protein signature 21 32 IPR001471 GO:0003700|GO:0006355
Accr8g01128 136 MobiDBLite consensus disorder prediction 84 108 - -
Accr8g01128 136 MobiDBLite consensus disorder prediction 84 107 - -
Accr8g01128 136 Gene3D AP2/ERF domain 19 79 IPR036955 GO:0003700|GO:0006355
Accr8g01128 136 ProSiteProfiles AP2/ERF domain profile. 20 78 IPR001471 GO:0003700|GO:0006355
Accr8g01128 136 SMART rav1_2 20 84 IPR001471 GO:0003700|GO:0006355
Accr8g01128 136 MobiDBLite consensus disorder prediction 1 22 - -
Accr8g01128 136 SUPERFAMILY DNA-binding domain 20 79 IPR016177 GO:0003677
Accr8g01128 136 FunFam Ethylene-responsive transcription factor 2 20 79 - -
Accr8g01128 136 Pfam AP2 domain 20 70 IPR001471 GO:0003700|GO:0006355
Accr8g01128 136 PANTHER DNA-BINDING DOMAIN 18 131 IPR044808 GO:0003700|GO:0009873
Accr8g01128 136 CDD AP2 28 79 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01128 Accr-Chr8 29185910 29186320 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01128 20 133 AP2-EREBP Transcription Factor Family AT3G23230 62.810 1.56e-44 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr8g01128 AP2 3.3e-17 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01128 - - pcin:129299756 143.28