Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01127 ATGGATGGGCACACGGGCAGGTCGGAGAAGGGGAAGGAGGAAATCCGATACCGGGGAGTTCGGAAGCGGCCGTGGGGGAAGTACGCGGCAGAGATAAGGGATCCATCGAGGCAAGGGGCGAGGCAGTGGCTGGGGACGTTTGATACGGCGGAGGAAGCAGCAAGAGCTTATGACAAAGCTGCCTTTAACATGAGAGGTCATCTCGCAATCCTTAATTTCCCCACCGAATACTATGCTCATGTACGAGGTTCCCCACCATATCCTCCCTACTTAGCTTCTTCTTCTTCTTCGTCGCCGCCGGGTCGTGCAAGTGGAAGCTCGTCGTCGTCGTCTGGTGGGCGGGGGCAAGTTTTTGAGTTTGAGTGTTTGGATAATCAGGTTCTGGAAGACCTTCTTGAAACGGAAGACGGAAAGAAGAAAAGTGGTGGAGATTGA 435 0.5402 MDGHTGRSEKGKEEIRYRGVRKRPWGKYAAEIRDPSRQGARQWLGTFDTAEEAARAYDKAAFNMRGHLAILNFPTEYYAHVRGSPPYPPYLASSSSSSPPGRASGSSSSSSGGRGQVFEFECLDNQVLEDLLETEDGKKKSGGD 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01127 144 CDD AP2 16 74 IPR001471 GO:0003700|GO:0006355
Accr8g01127 144 PRINTS Ethylene responsive element binding protein signature 17 28 IPR001471 GO:0003700|GO:0006355
Accr8g01127 144 PRINTS Ethylene responsive element binding protein signature 40 56 IPR001471 GO:0003700|GO:0006355
Accr8g01127 144 MobiDBLite consensus disorder prediction 89 115 - -
Accr8g01127 144 Gene3D AP2/ERF domain 15 76 IPR036955 GO:0003700|GO:0006355
Accr8g01127 144 PANTHER DNA-BINDING DOMAIN 10 133 IPR044808 GO:0003700|GO:0009873
Accr8g01127 144 MobiDBLite consensus disorder prediction 84 115 - -
Accr8g01127 144 Pfam AP2 domain 16 67 IPR001471 GO:0003700|GO:0006355
Accr8g01127 144 SUPERFAMILY DNA-binding domain 16 76 IPR016177 GO:0003677
Accr8g01127 144 FunFam Ethylene-responsive transcription factor 2 16 76 - -
Accr8g01127 144 ProSiteProfiles AP2/ERF domain profile. 16 74 IPR001471 GO:0003700|GO:0006355
Accr8g01127 144 SMART rav1_2 16 80 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01127 Accr-Chr8 29150993 29151427 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01127 13 139 AP2-EREBP Transcription Factor Family AT3G23230 61.417 1.65e-47 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr8g01127 AP2 1.6e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01127 - - tcc:18603202 167.162