Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01125 ATGGGGAAGAAAAAGGAACAAGTTGGAGATAAATCAAGTGATGATGGTAGAAATCCAAGCAAAGGTGGAGATAGTAGCCCCAAAGCGTATGATAAGGATACAATGGTGTTCATATCCATGGCTCAGGAGTTGAAGGATGAGGGGAACAAGCTATTCCAAAAGAGGGACCATGAAGGAGCCTTGATAAAATATGAGAAAGCTCTCAAGTTGCTTCCCAAAAATCATATAGATGTGTCATATCTACGGAGTAACATGGCAGCATGCTACATGCAGATGGGACTTGGTGAGTACCCCAGGGCAATACATGAATGCAATTTAGCCCTTGAGGTTACGCCAAAATACAGCAAGGCATTGTTGAAGAGGGCAAGATGCTATGAAGGTTTAAATAGACTGGATTTGGCTCTAGGAGACGTCAGTACCGTTTTGAAGATGGAATCAAACAATATCATGGCATTGGAGATTTCTGAAAGGTTGAAAAAAACACTCGAGGAGAAAGGATTAAGAGTGAATGATACAGTGATTGAGTTGCCTCCTGATTATGTCGAACCGGCCTATGCTTTGCCTCCAGAAAAAGCAGTGAAAGAGAAGACACGCAAGAAGAAGAGCAACAAAGTTGAGGTGAAGACCATTGATAATAAAACTGTAGAAAAACAAGATGAGGAGAAATTGGAAGAGAAGAAGGTTGAGGACAATATTGAGAAGGCTGGGAAGAAGGCTGATGAGAAGAAGTCCAAAAGGAAGGCCAAGGAAAAAATTGATGAGAAGAAGGCTGATGTTAAGGAGGTTGTGGAAGAAACAATTAATGGTAGAAGAGATGATATGCCTAAGAAAACAGCAAAACTTGTTTTTGGTGAAGACATAAGGTGGGCTGAATTGCCGATTAATTGCACCCTTTTGCAGTTAAGAGAAGTTATTTGTGACCGCTTCCCAACCCTAGGAGCTGTTCTTGTCAAGTACAGAGATCAAGAAGATGATTTGGTGACAATCACTTCTGATTCTGAATTGAGATTGGCTGAAACTTCAGCAGGATCACAAGGTTCAGTCCGGCTGCACATTGTTGAAGCAACTCCTGAGCAGGATCCACTATTTGAGAAACTTAATAAAATGGAGTTGCAAAGGTCTCCTGTGAGTGAAGCACCTGAGAATGGTTGTGTGTTGAAAGAAAAGGAAGTGATAAACTCATCTTGCATTGAGGATTGGACAATCCGGTTTGCCCAGCTATTCAAAAACCATGTTGGATTTGAATCTGACAGATATTTGAATTTTCATGAGCTTGGGATGAAGCTCTATTCTGAGGCTATGGAGGATACAGTCACAAGTGAAGAAGCACAAGGCTTATTTGACATGGCAGGACATAAGTTCCAAGAGATGACAGCCCTAGCATTGTTCAACTGGGGAAATGTTTACATGTCTAGGGCAAGGAAGAAAGTGTATTTCACTGAAGATTCTTCTAAGAAACATCTGCATGAACAAATCAAAAGTGCACATGACTGGGCACAAAAAGAATATGAAAAAGCGGGAGAAAAATATGAAGCAGCCATTCAAATAAAATCAGATTTTTATGAAGGCTTTCTGGCGCTGGGGCAGCAACAATTTGAGCAAGCAAAACTTACTTGGTATTATAATGCGATCAGTAATGGGGCTGATTTGGTGACATGGCCCTCTGCTCATGTTCTTCAGCTTTACACTAATGCTGAAGATAATATGGAAAAAGGAATGCAGTTATGGGAACAGTCAGAGGAGCATTGCTTGATTGAAGCCTCTAAACCCAAGGATGTCAAATTGCTCGTACATGACATGGGATTGGATGGAATGTTTAAAAATATGTCAGCAGATGAAATTGCTGCACAGGCTGCAAATATGAGTTCTCAGATAAATCTGCTTTGGGGTACCCTGCTATATGAGCGTTCAATTGTGGAATTCAAAGTCGGGTTACCAGTATGGCATGAATCTCTGGAAGTAGCTGTCGAGAAGTTTAAACTTGCTGGAGCTTCTCCAACAGATATAGCTGTGATGTTGAAGAATCACTGTTCAAATAATACGGCTGCAGATGGTCTAGAATTCAAAATTGATGAAATAGTACAAGCATGGAATGAGATGTATGAAGCTAAAAAGTGGCAGCGTGGAGTTCCTTCATTTCGCTTGGAAACCTTATTTAGGAGGCGAGTTTCAAAAATCTATCATGCCTTGGAGCTTGTGTGA 2202 0.4092 MGKKKEQVGDKSSDDGRNPSKGGDSSPKAYDKDTMVFISMAQELKDEGNKLFQKRDHEGALIKYEKALKLLPKNHIDVSYLRSNMAACYMQMGLGEYPRAIHECNLALEVTPKYSKALLKRARCYEGLNRLDLALGDVSTVLKMESNNIMALEISERLKKTLEEKGLRVNDTVIELPPDYVEPAYALPPEKAVKEKTRKKKSNKVEVKTIDNKTVEKQDEEKLEEKKVEDNIEKAGKKADEKKSKRKAKEKIDEKKADVKEVVEETINGRRDDMPKKTAKLVFGEDIRWAELPINCTLLQLREVICDRFPTLGAVLVKYRDQEDDLVTITSDSELRLAETSAGSQGSVRLHIVEATPEQDPLFEKLNKMELQRSPVSEAPENGCVLKEKEVINSSCIEDWTIRFAQLFKNHVGFESDRYLNFHELGMKLYSEAMEDTVTSEEAQGLFDMAGHKFQEMTALALFNWGNVYMSRARKKVYFTEDSSKKHLHEQIKSAHDWAQKEYEKAGEKYEAAIQIKSDFYEGFLALGQQQFEQAKLTWYYNAISNGADLVTWPSAHVLQLYTNAEDNMEKGMQLWEQSEEHCLIEASKPKDVKLLVHDMGLDGMFKNMSADEIAAQAANMSSQINLLWGTLLYERSIVEFKVGLPVWHESLEVAVEKFKLAGASPTDIAVMLKNHCSNNTAADGLEFKIDEIVQAWNEMYEAKKWQRGVPSFRLETLFRRRVSKIYHALELV 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01125 733 Pfam PB1 domain 278 354 IPR000270 GO:0005515
Accr8g01125 733 SMART tpr_5 115 148 IPR019734 GO:0005515
Accr8g01125 733 SMART tpr_5 41 74 IPR019734 GO:0005515
Accr8g01125 733 SMART tpr_5 79 114 IPR019734 GO:0005515
Accr8g01125 733 CDD PB1 284 352 - -
Accr8g01125 733 Gene3D - 277 358 - -
Accr8g01125 733 ProSiteProfiles PB1 domain profile. 276 355 IPR000270 GO:0005515
Accr8g01125 733 SUPERFAMILY CAD & PB1 domains 276 365 - -
Accr8g01125 733 PANTHER PROTEIN CLMP1 3 731 IPR044517 -
Accr8g01125 733 MobiDBLite consensus disorder prediction 1 31 - -
Accr8g01125 733 Gene3D Tetratricopeptide repeat domain 38 171 IPR011990 GO:0005515
Accr8g01125 733 SMART PB1_new 276 355 IPR000270 GO:0005515
Accr8g01125 733 MobiDBLite consensus disorder prediction 1 18 - -
Accr8g01125 733 SUPERFAMILY TPR-like 41 535 IPR011990 GO:0005515
Accr8g01125 733 Coils Coil 225 265 - -
Accr8g01125 733 ProSiteProfiles TPR repeat profile. 41 74 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01125 Accr-Chr8 29114087 29116360 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01125 24 164 Calmodulin-binding Proteins AT3G25230 30.968 4.34e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01125 K26538 - gmx:100778972 1034.25