Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01104 ATGGATAACAAGACCACCTTTGACTCCGATATTGTTCTTCTACAATCTATCGGAAGCTACCTTCTTGATGACCACTCCGATGCTCTCATTGCATTTCCAGCCACATTCACCGGCGACGCTCCAGTTTGCCTCCAGAGTTCTAGCTCCGGGATGACAGAGAACAGCAACGGTGAGATCAGCTCTCCATCTTTCTCGCTCGAACAAGCAAACAGTGGCTCCGTACAGGCAGAGCTTTGCAGTGCAGATGCAGTGGAGCGTGGAGTTCACGTGCAGCCGAGTGGGAGAGGCTATAGAGGAGTAAGGCGGAGGCCGTGGGGGAAATACGCAGCGGAGATTAGAGATCCAAAGAAGAACGGCGCGAGAGTGTGGCTAGGGACTTATGAGACGGCTGAGGATGCGGCTTTGGCTTATGATCAAGCCGCTTTCAAGATGCGAGGCTCCAAAGCCAAGCTAAATTTTCCTCATCTTATTGGCTCGAATATGTCAGAACCACCCAGAGTGACCGGAAAGCGGCGGTTTCCGGAGCCTTGTGAGGAGGAGTCATGGACGAAAGTGAAGAGAGCGAAGAGCCAAGTGAACATATTCATGTGGGATACATGTGAGACAAACAATGGGAACCAATATTTATAA 630 0.5079 MDNKTTFDSDIVLLQSIGSYLLDDHSDALIAFPATFTGDAPVCLQSSSSGMTENSNGEISSPSFSLEQANSGSVQAELCSADAVERGVHVQPSGRGYRGVRRRPWGKYAAEIRDPKKNGARVWLGTYETAEDAALAYDQAAFKMRGSKAKLNFPHLIGSNMSEPPRVTGKRRFPEPCEEESWTKVKRAKSQVNIFMWDTCETNNGNQYL 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01104 209 SMART rav1_2 96 160 IPR001471 GO:0003700|GO:0006355
Accr8g01104 209 FunFam Ethylene-responsive transcription factor 2 95 155 - -
Accr8g01104 209 CDD AP2 104 156 IPR001471 GO:0003700|GO:0006355
Accr8g01104 209 PANTHER DNA-BINDING DOMAIN 71 171 IPR044808 GO:0003700|GO:0009873
Accr8g01104 209 SUPERFAMILY DNA-binding domain 96 155 IPR016177 GO:0003677
Accr8g01104 209 PRINTS Ethylene responsive element binding protein signature 97 108 IPR001471 GO:0003700|GO:0006355
Accr8g01104 209 PRINTS Ethylene responsive element binding protein signature 120 136 IPR001471 GO:0003700|GO:0006355
Accr8g01104 209 Gene3D AP2/ERF domain 96 155 IPR036955 GO:0003700|GO:0006355
Accr8g01104 209 ProSiteProfiles AP2/ERF domain profile. 96 154 IPR001471 GO:0003700|GO:0006355
Accr8g01104 209 Pfam AP2 domain 96 146 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01104 Accr-Chr8 28669573 28670202 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01104 94 193 AP2-EREBP Transcription Factor Family AT2G44840 69.000 3.32e-45 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr8g01104 AP2 8.4e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01104 K09286 - qsa:O6P43_017200 184.496