Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01093 ATGGCTATCACTGTTTTTGCTTTTATGCTATTACTGCAGTTGCCAAGAATTTTTGGCTTTGGGGATTTGTTTCAGTTAAAGGATTGTGGTGCGAATCGGGTTGCCTATTCATGTTCTCATGGTCAAGAAATATTCTACTTAAACGAGAATGTTGTTAGCAAAGACACTTTCTGCAAGACCCTTCAGTTATATATGGCAAATGGTTGTGATGCCAAGTACTATTTTGGAAGTACAAGCTGTGGGCTGGGAGTTTCTTTTGGAAGAAAGCTTTTGCAGAAGGATATAAGTGATAACTCAACATTCCCAGGTCACAAGAACGCTTCTATGCCCCTATCAGCCTCAAAAGTTGGCATAGCTGCAAGTGGAGCTTTTTTATGTTGTGTTTTTCTTTGTCCTTGTTTCTATGGGAAGAGACAAAAAGCTGCTGCTAATGCTTCCAAGGACCCAAATTCAATGGATTCAGATTCCTCATTGGAAGGGAACTCTGTTTCTGAGAAGATCCAAGGCTCTGTCCATCGGGTACCACCTAGTCCTTCAAGATTTTCAATGTCTCCAAAACTCAGTAGACTTGGGTCAATACATCTCAACTTGAGTCAGGTTATGAAAGCTACTCATAATTTCTCCAATAAATTACAAATAGGAGAAGGAGGTTTTGGAACTGTCTACAAGGCTCAGCTAGAAGGTGGTCAGGTTGTGGCGGTAAAGCGTGCCAAAAAGGAACATTTTGAGAGTTTGAGAACTGAATTCAGCAGTGAAGTTGAACTTCTGGCCAAAATTGATCATCGAAACCTGGTGAAGTTACTAGGTTATATTGACCAAGGAAATGAACGCCTTCTTATAGCAGAGTATGTCCCAAATGGTACTCTTAGAGAACATTTGGATGGTTTGCGGGGAAGGATTCTTGACATCAATCAGCGCCTTGAAATTGCCATTGATGTTGCTCATGGCTTGACCTATCTACATCGCTACGCGGAAAAGCCAATTATCCATAGAGATGTGAAATCATCCAACATTCTTCTCACGGAAAGTATGAGAGCTAAAGTTGCTGATTTTGGATTTGCAAGACTTGGTCCAATGGACTCTGATCAAACACACATCTCTACCAAAGTGAAAGGAACAGTTGGTTATTTGGACCCAGAATACATGAAAACATATCAGCTTACTCCCAAGAGTGATGTTTATTCATTTGGAATTTTGCTTTTAGAAATTGTGACCGGCCGCCGTCCTTTGGAGGTGAAGAAACCCCTTGAAGAGAGGGTGACATTGAGATGGGCTTTCAGAAAGTATAATGAAGGGAATGTGATGGAAATGGCGGATCCTTTAATGGAGGAAGGTGGAAATGGAGAGGTTCTGAAGAAGATGAGTGGGTTAGCAATTCAATGTGCAGCACCAAGTCGAGGTGATCGGCCAGACATGAAGTCGGTGGGAGAGCAATTGTGGACGATCAGGGCAGAATTCCTCAAGAGTTCGAAAAGAGTATAG 1482 0.4184 MAITVFAFMLLLQLPRIFGFGDLFQLKDCGANRVAYSCSHGQEIFYLNENVVSKDTFCKTLQLYMANGCDAKYYFGSTSCGLGVSFGRKLLQKDISDNSTFPGHKNASMPLSASKVGIAASGAFLCCVFLCPCFYGKRQKAAANASKDPNSMDSDSSLEGNSVSEKIQGSVHRVPPSPSRFSMSPKLSRLGSIHLNLSQVMKATHNFSNKLQIGEGGFGTVYKAQLEGGQVVAVKRAKKEHFESLRTEFSSEVELLAKIDHRNLVKLLGYIDQGNERLLIAEYVPNGTLREHLDGLRGRILDINQRLEIAIDVAHGLTYLHRYAEKPIIHRDVKSSNILLTESMRAKVADFGFARLGPMDSDQTHISTKVKGTVGYLDPEYMKTYQLTPKSDVYSFGILLLEIVTGRRPLEVKKPLEERVTLRWAFRKYNEGNVMEMADPLMEEGGNGEVLKKMSGLAIQCAAPSRGDRPDMKSVGEQLWTIRAEFLKSSKRV 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01093 493 CDD STKc_IRAK 213 479 - -
Accr8g01093 493 Pfam Protein tyrosine and serine/threonine kinase 211 479 IPR001245 GO:0004672|GO:0006468
Accr8g01093 493 MobiDBLite consensus disorder prediction 145 182 - -
Accr8g01093 493 ProSitePatterns Protein kinases ATP-binding region signature. 213 239 IPR017441 GO:0005524
Accr8g01093 493 ProSitePatterns Serine/Threonine protein kinases active-site signature. 328 340 IPR008271 GO:0004672|GO:0006468
Accr8g01093 493 SMART serkin_6 207 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01093 493 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 284 493 - -
Accr8g01093 493 Gene3D Transferase(Phosphotransferase) domain 1 284 492 - -
Accr8g01093 493 Gene3D Phosphorylase Kinase; domain 1 178 283 - -
Accr8g01093 493 MobiDBLite consensus disorder prediction 145 168 - -
Accr8g01093 493 ProSiteProfiles Protein kinase domain profile. 207 487 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01093 493 SUPERFAMILY Protein kinase-like (PK-like) 190 482 IPR011009 -
Accr8g01093 493 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 179 283 - -
Accr8g01093 493 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 111 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01093 Accr-Chr8 28373835 28378069 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01093 119 483 Receptor kinase-like Gene Family AT3G46290 40.107 5.02e-75 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Accr8g01093 PK_Tyr_Ser-Thr 2.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01093 - - gmx:100798260 701.434