Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Accr8g01060 | ATGGCTTGGTTTAATGGGGGTAGCTTCTCGGCCGAGAAGTCGGTTCGCCCGACTCGGCTCTGCTACGTTCCTACTCACTGCAGGAACAATGGCATGCCTGATTTCAACACTGTGAACTCATTCATGTCGGGAAATGGGTCTTCAGCTCAGTCTGGTTTCGCATCCTTCAACTCTTACGGTTCCAGACGACAAGCGAGGGGTCGTGGTGCGAGTAACGGCCGTTTTGGTGGTCGTGGTCGTGGTCGTGGTCGTGGAGGCCGGAGGTTTGGTCGACCGGAGGAGACTGATGAGCAGAACCATTACCCGAATCGGAACGGTTTTAGGATTGACACGCTTGACACTAAAGAGAGTTTTGGAGAAGATGGCGATGTCTGTGGTGGTATTAATTTTGACGCATACGAAGATATTCCAGTAGAGGTCAGTGGTTCCGACGTACCCCCGCCGGTCAATACCTTCGCAGAAATAGAGCTGAGCGAGGGTTTGTACAAGAATATCAAGCGATGCAAGTACGTCAAACCCACTCCGATTCAGCGTCATGCGATTCCCATTGCCGTTGCTGGTCGCGACTTGATGGCTTGTGCTCAGACCGGGTCAGGGAAGACGGCGGCGTTCTGTTTCCCGATTATATCTGGGGTTTTGAGGGATCGTTCTAGGTTTTTGCCTACTGCTCGTGAAGGCTGGATTGCTTATCCCACTGCGCTTATAATGTCACCAACTAGGGAGTTGTCATGTCAGATTCATGATGAGGCCAAGAAGTTCGCTTATAAGACCAGAGTGAAGATTGTTGCTGCTTATGGTGGGGCCCCGATTGCTTTGCAGTTTCGCAATTTAGAAAAAGGGGTGGACATCTTAGTTGCAACTCCTGGGCGCCTAGTTGATATGATTGAGAGAGGCAGGGTTTCACTCACACGAATAAAATTCCTTGCGCTTGATGAGGCAGATCGCATGTTGGACATAGGCTTTGAGCCTCAAATTCGGAAGATCGTTTTGCAGATGGATATGCCTCCACCAGGTGCTAGACAGACTATGCTCTTCAGTGCCACGTTCCCAGAGGATATACAGAAGCTGGCTGCGGACTTTCTTTCAAACTACATAGTCTTAGCAATTGGAAGAATTGGTTCCAGCACTGAATTGATTGTACAAAAAGTTGAACTTGTTCAGGATATGGACAAAAGAGACCATCTTTTGGATCTTCTCCGTTCTCAAAGGGTTAATGGGTTCAATGGAAAGAAAGCTTTGACTCTAGTATTTGTTGAAACAAAAAGAGGAGCAGATGCTTTGGAATATTGGCTGTTGAGAAAAGGTTTTCCAGCTATTGCGATACATGGCGACAAAGTTCAAGTGGAGAGGGAAAGCGCCTTGAGATCTTTCAAAAGTGGTGCTCGGCCTATTTTGGTCGCAACCGATGTTGCTTCAAGGGGTTTAGACATACCACATGTGGGTCATGTTGTCAATTTCGACTTGCCGAGAGATATAGATGGCTATGTTCACAGAATTGGCCGAACTGGTCGTGCCGGCAAGTCTGGTTTGGCCACTGCTTTCTTCAGTGAGAAAAACATTCCTCTTGCAAAGGTCCTTGTTGAACTTATGCAAGAATCAAACCAAGAGGTTCCCTCTTGGCTCACCCAATATGCAGCAGAGAGTTCTTCATACGATATCCGTAGCAGCAAAAGGGGCCAGTGGTATGGTAAAGGCAATTACGGCGGCCAGGACTTCAGAAATATGACTCAACATGAAGAAGGGTATCACAACCACTCAGTGGATGCAGGTTCTGTAGAGAACTCTGGCACTATAACTGCAGATTATGACATGTCTGATTCTTACAATGACTCTTATGATATAGCCAACACAGTTCCTGCTACTGGCAGCAATTACCATTACAGTGATGCCGGCGCTTATTATGGAGGTGGGGGGGCTGACGCACCGAATGGGTATGAATCAGTTGTTCCTACTGGTTGGGATTAG | 1965 | 0.4774 | MAWFNGGSFSAEKSVRPTRLCYVPTHCRNNGMPDFNTVNSFMSGNGSSAQSGFASFNSYGSRRQARGRGASNGRFGGRGRGRGRGGRRFGRPEETDEQNHYPNRNGFRIDTLDTKESFGEDGDVCGGINFDAYEDIPVEVSGSDVPPPVNTFAEIELSEGLYKNIKRCKYVKPTPIQRHAIPIAVAGRDLMACAQTGSGKTAAFCFPIISGVLRDRSRFLPTAREGWIAYPTALIMSPTRELSCQIHDEAKKFAYKTRVKIVAAYGGAPIALQFRNLEKGVDILVATPGRLVDMIERGRVSLTRIKFLALDEADRMLDIGFEPQIRKIVLQMDMPPPGARQTMLFSATFPEDIQKLAADFLSNYIVLAIGRIGSSTELIVQKVELVQDMDKRDHLLDLLRSQRVNGFNGKKALTLVFVETKRGADALEYWLLRKGFPAIAIHGDKVQVERESALRSFKSGARPILVATDVASRGLDIPHVGHVVNFDLPRDIDGYVHRIGRTGRAGKSGLATAFFSEKNIPLAKVLVELMQESNQEVPSWLTQYAAESSSYDIRSSKRGQWYGKGNYGGQDFRNMTQHEEGYHNHSVDAGSVENSGTITADYDMSDSYNDSYDIANTVPATGSNYHYSDAGAYYGGGGADAPNGYESVVPTGWD | 654 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Accr8g01060 | 654 | FunFam | ATP-dependent RNA helicase RhlB | 370 | 549 | - | - | |
Accr8g01060 | 654 | CDD | SF2_C_DEAD | 379 | 515 | - | - | |
Accr8g01060 | 654 | PANTHER | ATP-DEPENDENT RNA HELICASE DBP3 | 114 | 545 | - | - | |
Accr8g01060 | 654 | MobiDBLite | consensus disorder prediction | 61 | 106 | - | - | |
Accr8g01060 | 654 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 181 | 367 | IPR014001 | - | |
Accr8g01060 | 654 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 391 | 545 | IPR001650 | - | |
Accr8g01060 | 654 | Pfam | DEAD/DEAH box helicase | 174 | 356 | IPR011545 | GO:0003676|GO:0005524 | |
Accr8g01060 | 654 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 232 | 523 | IPR027417 | - | |
Accr8g01060 | 654 | Gene3D | - | 367 | 549 | IPR027417 | - | |
Accr8g01060 | 654 | CDD | DEADc_DDX3_DDX4 | 151 | 373 | IPR044763 | GO:0003724|GO:0005524 | |
Accr8g01060 | 654 | SMART | helicmild6 | 425 | 506 | IPR001650 | - | |
Accr8g01060 | 654 | SMART | ultradead3 | 169 | 382 | IPR014001 | - | |
Accr8g01060 | 654 | Gene3D | - | 113 | 366 | IPR027417 | - | |
Accr8g01060 | 654 | MobiDBLite | consensus disorder prediction | 86 | 106 | - | - | |
Accr8g01060 | 654 | Pfam | Helicase conserved C-terminal domain | 391 | 506 | IPR001650 | - | |
Accr8g01060 | 654 | ProSiteProfiles | DEAD-box RNA helicase Q motif profile. | 150 | 178 | IPR014014 | GO:0003724 | |
Accr8g01060 | 654 | FunFam | Probable ATP-dependent RNA helicase DDX4 | 114 | 369 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Accr8g01060 | Accr-Chr8 | 27485281 | 27488995 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Accr8g01060 | 132 | 538 | Eukaryotic Initiation Factors Gene Family | AT3G19760 | 31.618 | 2.19e-58 | 200 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Accr8g01060 | K11594 | - | qsa:O6P43_023075 | 758.829 |