Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01026 ATGGCCACCATAACTCTGCTCTTACTATTTGCAGTTCTATCTGCAAACGAAGTTAGAGCTCAAAAATATGATTCCAACATCATAAATTTAGGTTCTTTTCTCTCCCCAAAAACGAATTCCACTTCATGGATTTCACCATCGGGTCTTTTTTCCTTCGGCTTTTATCCACAAGATGATGGCTTTGCTGTTGGAATACGGCTAAAGGGTGAACATGAAGGAACAATCGTTTGGACACCTAACTTGAACAATCTATCTGCTTCCTCTGATTCAGTAATGGAATTAACCAAAGACGGTCAACTTGTGCTTAGAAATGAGCCAAAACAGAGAGTAGTAGTCATTGCTAATGTGTCTGAGCCTGCAGATTCAGCATCTATGCTTGATTCTGGGAATTTCGTGCTTTACAGCAAAAACCATACTGTCATCTGGAAAAGCTTTGATCACCCTTCGGACACCTTACTAGCAGGTCAGAATTTAACATCTGCAGGACAACAATTGATCTCTGCAAATGGACATTTTATTCTCAGAATGGATACAGATAGCAATCTCGCTTCCTTCCCTGTGAACGATCAAAGAGGAGAAGGTATTTACTGGTTTGAGGGAGCCATCTCGATGCTTAATCTTAATCTTACAGGCTTTCTTTGCCTGCTCGATTATTATGGGAAACCCACTAAGGTTCTGGCCAACAGTAGCAACCATCTTCGAAGGAACACGAGCTTAATCTATCGTGCAACCTTGGATTTGGATGGTAACTTTAGATTGTATGTTCACACATTTGAGAAGAATTCTACTAGATTTGTCAATGTTCAGCCTGTGTGGCAGTCTAATTCTAATCAATGTGAAGTCAAGGGATTTTGTGGTTTCAACAGTTATTGTTCCACGAATAGAGGTAAAGCTGTTTGTGAGTGTTATCCTGGATTCGTGCCCATAAATCGGAATCAAAACATCACGTTCTTTGATTGTTATCAAAGGAGCCAAGATGACTGTAAAACTAGTGAAGATCCAAAGATGTTGTACGATGTTGTTCACTTACAACATGTTCAATATTGGAGCCTTCTTCCTTATTGGGTCATACCATTGGAAATGGAACTGGATGCTTGTGGGAAGTCTTGCCAGGAAGACTGCGATTGTGGGGCAGCGTTATATGAAGATGGAAGGTGCAAGAAGTATAGGCTTCCGCTTAGATATGGCAGAATTCAGCAAAATGTATCAACCACAGCCTTCTTCAAATTGCCTTCAAGAAATATCATTCCTTCAAAACCAAAGAAGCCGGAGGTTCTTGTTGATGACAAGAAAAATCTGATTTTGACCCTGGTGATCACTCTAGGCTCAATTTCATTTGCTGGATTACTCTTTGCAATGTCTATTTTCTTCATCTACAACCGTCAAGTCCATTCCTACAGAAAGCTATCTGCAAGTGCGAATCTAGGATTCAATGAGGATTGTAGTCTACGAATATTTTCTTTTAATGAATTGGTGAATGCAACAGAAAACTTCACAGAAGATATCGGCAGAGGATCTTTTGGAGTGGTCTACAAGGGGGAAATTCAAGGAAACAATAGAAGGATAGCTGTGAAGAAGCTAGACGATGTTGTTGTTGACGAAGGAGAAAGAGAATTTCAAGCTGAAATCACTACAATCGCTCGAACTTATCACAGAAATCTAGTTCAGCTCATTGGTTATTGCATTGATGGGTCAAGAAAGCTTCTTGTTTATGAATATATGAGCAATGGGTCTCTAGCAGATTTTCTGTTCAAGGCTGAGATGCATCTATCTTGGAAACAGAGAATCAAAATTGCATTGGACGTAGCTAGGGGAATCTTATATCTACATGAAGAATGTAAGGTCTGTATTGTCCACTGCAATATCAAGCCTCATAACATTCTGTTGGATGAAATGTGGACAGCAAAAATATCAGACTTTGGATTTGCAAGACTCTCAATTCAAGAACATTCAAGAATCAGATCTAGCAACGAATTAACAAGTGGCTATGTGGCGCCAGAACGTCAGAAAGATGCATCAACATCCATAAAAGTTGACATCTACAGCTATGGCGTGGTGTTGCTAGAGATAATATGTTGCAGAAGAAATATAGATGTGAATGTGGCTACAGAAGAGGAAATAATGCTTTCAAGTTGGGTTTATAATTGCTTTGTGAAAGGGGAATTGAACAAATTGGTAGAATTAGATGAAGATGTAGAATGGAGGACACTAGAGAGAATGGTGAAGGTGGCGTTATGGTGCGTCCAAGAGGACTTGTCTCTACGTCCTTCCATGAAGAATGTGATATTGATGCTGGAAGGGTTGAAGGATATTCCAATTCCTCCATCTCCAATCCCACTTGCTTGA 2346 0.3986 MATITLLLLFAVLSANEVRAQKYDSNIINLGSFLSPKTNSTSWISPSGLFSFGFYPQDDGFAVGIRLKGEHEGTIVWTPNLNNLSASSDSVMELTKDGQLVLRNEPKQRVVVIANVSEPADSASMLDSGNFVLYSKNHTVIWKSFDHPSDTLLAGQNLTSAGQQLISANGHFILRMDTDSNLASFPVNDQRGEGIYWFEGAISMLNLNLTGFLCLLDYYGKPTKVLANSSNHLRRNTSLIYRATLDLDGNFRLYVHTFEKNSTRFVNVQPVWQSNSNQCEVKGFCGFNSYCSTNRGKAVCECYPGFVPINRNQNITFFDCYQRSQDDCKTSEDPKMLYDVVHLQHVQYWSLLPYWVIPLEMELDACGKSCQEDCDCGAALYEDGRCKKYRLPLRYGRIQQNVSTTAFFKLPSRNIIPSKPKKPEVLVDDKKNLILTLVITLGSISFAGLLFAMSIFFIYNRQVHSYRKLSASANLGFNEDCSLRIFSFNELVNATENFTEDIGRGSFGVVYKGEIQGNNRRIAVKKLDDVVVDEGEREFQAEITTIARTYHRNLVQLIGYCIDGSRKLLVYEYMSNGSLADFLFKAEMHLSWKQRIKIALDVARGILYLHEECKVCIVHCNIKPHNILLDEMWTAKISDFGFARLSIQEHSRIRSSNELTSGYVAPERQKDASTSIKVDIYSYGVVLLEIICCRRNIDVNVATEEEIMLSSWVYNCFVKGELNKLVELDEDVEWRTLERMVKVALWCVQEDLSLRPSMKNVILMLEGLKDIPIPPSPIPLA 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01026 781 Pfam S-locus glycoprotein domain 235 308 IPR000858 GO:0048544
Accr8g01026 781 FunFam S-receptor-like serine/threonine-protein kinase 466 573 - -
Accr8g01026 781 Gene3D - 149 279 IPR036426 -
Accr8g01026 781 Pfam Protein kinase domain 499 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01026 781 Gene3D - 24 147 IPR036426 -
Accr8g01026 781 ProSiteProfiles Protein kinase domain profile. 496 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01026 781 PIRSF SRK 1 781 IPR024171 GO:0004674
Accr8g01026 781 ProSitePatterns Protein kinases ATP-binding region signature. 502 526 IPR017441 GO:0005524
Accr8g01026 781 SUPERFAMILY Protein kinase-like (PK-like) 481 766 IPR011009 -
Accr8g01026 781 ProSiteProfiles Bulb-type lectin domain profile. 25 146 IPR001480 -
Accr8g01026 781 SMART blect_4 34 148 IPR001480 -
Accr8g01026 781 Gene3D Transferase(Phosphotransferase) domain 1 574 773 - -
Accr8g01026 781 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 574 773 - -
Accr8g01026 781 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 198 IPR036426 -
Accr8g01026 781 Pfam D-mannose binding lectin 74 160 IPR001480 -
Accr8g01026 781 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 34 776 - -
Accr8g01026 781 Gene3D Phosphorylase Kinase; domain 1 460 573 - -
Accr8g01026 781 CDD STKc_IRAK 502 768 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01026 Accr-Chr8 26618254 26620599 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01026 395 771 Receptor kinase-like Gene Family AT1G56120 37.922 5.36e-63 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Accr8g01026 Pkinase 1.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01026 - - pcin:129308930 823.542