Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01025 ATGGCGCCTACCCTCGCATCAAACACATGCTTTCTCTTTTTTGTATATTTTCTATGTGAAACAGTATTCACAGAAGAAATACAACTTGGCTCTTCAATTTCCCCCACCGATCCTACCACTTCATGGCCTTCACCTTCGGGTCGATTCGCATTCGGCTTTTACGAGCAAGGCGACGGCTTCAAAGTTGGAATCTGGCTGTCCGATGGGATTAATAAAACAATCGTCTGGACTGCGAATCGCAATGACCCTCCTGTCTCCGCAAAGTCAAGGCTTAATCTAACCAGAAACGGTGAGCTTCTTCTGCAAACAGGACCAGAAAAAAACAAGGTAATTGCTGATGGTAACAATGGAACTGTTTTCTATGCTGCCATGCTTGATTCTGGAAACTTTGTTCTGCAAAACGAAACTTTGGGCTTCCTTTGGCAGAGTTTCGATTACCCAACTGATACTTTGCTAGGGGGCCAAATTCTACTTGGTGGGAGTGAATTGGTGTCTACTTCATCAGACACCAACCAATCTTCTGGAAGGTTTCAACTCTCGATGCAGGTTGATGGAAACCTTGTTCTGTATCCACGATATTCTGATGCTCGCACATGGTGGGATGCTTACTGGGCCTCTGACAGTGATCGTGGCACTAGTTCCAAATATTATCTTTTCCTCAACAACACAAATCCCCAGCCTCTATGTATTGTAAATGCCAGTAGTTCCAACTCACAAATACTCTGGCGAGTGGATAATAGCAGCTTCGAAGGAAACAACATTATTTATCGCGTAACTATTGATTCTGATGGAGTTCTACGACTCTATGCTCATTTTGATGACGCAAATCGGGAACATCAAGTCAAAGAGTTATGGTCACCGACGGAGTTGAACAATCAATGCAACGTGAAGAGTTTCTGTGGGTTAAACAGCTATTGCACCTTCTATGACAACCAGCCTTCTTGCAGTTGCCTTCCCGGAACAGATTTTATAGATCCAAGTCAAAGAAATCTTGGGTGCAAAAGGAACTTCTCAGAAGCTGAATGCAAAGGAGGGAAAGATAACGCAACTTTCTATCGCATGATCCCTATGCCTAGTATGAATATGGGTGATCCTTATGTAGAGGAATACAACCTTCTGGAGGAGGAATGCCTATCTTCTTGTTTGCAAGATTGTTACTGTGGGGCTGTCTTTTATGAAGATAATCGGTGCAGAAAACAAAAGCTGCCCTTAAGATATGTTACAAGAGTCACACAAGGGTCCTCCTCCTACACATTGTACTTCAAGGTGGGAGTTCAAAGCCTCAAAAGCAACACTGTTATCGATAACCAACCACCTCCCATCAAGACTACCAGTAAGAAAGCAATTGTTCAGATCATTGTTGTCATCTTTGGTTTTGCTAGTCTTTTGTGTTCAGCTGTTACAATCTCTACCCGATTTATATACAAGATTAGAGTTTTAAGTTACAAGAGGTTGTTGGAGATTGGAGATTTGGGTTTGAACGAGGGGGTTGTTACTCTAAGGTTATTTTCATACAATGAGCTGAAGAAAGCAACGGATGGTTTCAAACAAGAGGTGGGTAAGGGTTCCTTCGGATCAGTTTACAAAGGAACTTTGCACAAAGGAAGCATATTGATTGCCGTAAAAAGGCTACAAAAGTTAGCTGAAGAAGGGGAGAAAGAATTTCAAGCTGAAATGCAAGCCATTGGTAAAACAAACCACAAAAACTTAGTTCGCTTGCTGGGATATTGTGCCGAGGGATCTAAAAGGCTTCTGGTTTATGAGTACATGAGTAGTGGCTCCCTTGAGAAGCTTATCTTTGGTGATAGTACCATACGTCCAGATTGGGATCAGAGAAGAAGAATAGCACTGGAAATTGCAAGAGGGTTACTGTATCTGCATGAAGAATGTGGGGCTCCCATCATTCACTGTGACATAAAGCCTCAAAACATATTGATGGACGAGTTTTGGACGGCTAAAATTTCAGACTTTGGCTTAGCAAAACTTCTAATGCCAGATCAAACAAGAACCTTTACTCAGGTTAGAGGGACAAGAGGTTATTTGGCTCCAGAATGGAACAAGAACACTCCAATATCAGTGAAAGCAGACGTTTATAGCTATGGAATACTGCTTCTGGAGATTGCATTTTGCAGAAGAAACTTAGTGGTAAACTCTTCGAATCCAGAGCAAATTGTTCTATGTAATTGGGTGTACAAGTGTTTTGTTCAGCGAGAGCTAAACAAGCTTGTTCTTGGGGAAGAGGTGGACCTGACGTTGCTAGAGAACATGGTGAAAGTGGGGATATGGTGTATTCAAGATGAACCTTTTCTTCGTCCATCAATGAAGAGTGTGGTGTTGATGCTTGAAGGAGTTTCGGAGGTGGCTATTCCTCCTTGTCCATCTTCTAATTCTATGTGA 2397 0.4226 MAPTLASNTCFLFFVYFLCETVFTEEIQLGSSISPTDPTTSWPSPSGRFAFGFYEQGDGFKVGIWLSDGINKTIVWTANRNDPPVSAKSRLNLTRNGELLLQTGPEKNKVIADGNNGTVFYAAMLDSGNFVLQNETLGFLWQSFDYPTDTLLGGQILLGGSELVSTSSDTNQSSGRFQLSMQVDGNLVLYPRYSDARTWWDAYWASDSDRGTSSKYYLFLNNTNPQPLCIVNASSSNSQILWRVDNSSFEGNNIIYRVTIDSDGVLRLYAHFDDANREHQVKELWSPTELNNQCNVKSFCGLNSYCTFYDNQPSCSCLPGTDFIDPSQRNLGCKRNFSEAECKGGKDNATFYRMIPMPSMNMGDPYVEEYNLLEEECLSSCLQDCYCGAVFYEDNRCRKQKLPLRYVTRVTQGSSSYTLYFKVGVQSLKSNTVIDNQPPPIKTTSKKAIVQIIVVIFGFASLLCSAVTISTRFIYKIRVLSYKRLLEIGDLGLNEGVVTLRLFSYNELKKATDGFKQEVGKGSFGSVYKGTLHKGSILIAVKRLQKLAEEGEKEFQAEMQAIGKTNHKNLVRLLGYCAEGSKRLLVYEYMSSGSLEKLIFGDSTIRPDWDQRRRIALEIARGLLYLHEECGAPIIHCDIKPQNILMDEFWTAKISDFGLAKLLMPDQTRTFTQVRGTRGYLAPEWNKNTPISVKADVYSYGILLLEIAFCRRNLVVNSSNPEQIVLCNWVYKCFVQRELNKLVLGEEVDLTLLENMVKVGIWCIQDEPFLRPSMKSVVLMLEGVSEVAIPPCPSSNSM 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01025 798 SUPERFAMILY alpha-D-mannose-specific plant lectins 71 200 IPR036426 -
Accr8g01025 798 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 34 793 - -
Accr8g01025 798 Gene3D - 21 146 IPR036426 -
Accr8g01025 798 Pfam D-mannose binding lectin 73 155 IPR001480 -
Accr8g01025 798 FunFam S-receptor-like serine/threonine-protein kinase 490 589 - -
Accr8g01025 798 ProSitePatterns Serine/Threonine protein kinases active-site signature. 634 646 IPR008271 GO:0004672|GO:0006468
Accr8g01025 798 CDD STKc_IRAK 519 783 - -
Accr8g01025 798 ProSitePatterns Protein kinases ATP-binding region signature. 519 542 IPR017441 GO:0005524
Accr8g01025 798 SUPERFAMILY Protein kinase-like (PK-like) 497 782 IPR011009 -
Accr8g01025 798 ProSiteProfiles Protein kinase domain profile. 513 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01025 798 SMART blect_4 24 147 IPR001480 -
Accr8g01025 798 SMART serkin_6 513 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01025 798 ProSiteProfiles Bulb-type lectin domain profile. 24 145 IPR001480 -
Accr8g01025 798 PIRSF SRK 1 798 IPR024171 GO:0004674
Accr8g01025 798 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 590 789 - -
Accr8g01025 798 CDD B_lectin 44 147 IPR001480 -
Accr8g01025 798 Gene3D - 148 299 - -
Accr8g01025 798 ProSiteProfiles Bulb-type lectin domain profile. 148 281 IPR001480 -
Accr8g01025 798 Coils Coil 541 561 - -
Accr8g01025 798 Pfam Protein kinase domain 516 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01025 798 Gene3D Transferase(Phosphotransferase) domain 1 590 788 - -
Accr8g01025 798 Gene3D Phosphorylase Kinase; domain 1 493 589 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01025 Accr-Chr8 26594304 26596700 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01025 503 791 Receptor kinase-like Gene Family AT5G20050 42.071 1.27e-67 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Accr8g01025 Pkinase 1.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01025 - - pcin:129309635 1030.39