Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01016 ATGGCTACCATTGCATCATCAAACATATACTTTCTCTTTTTGGTATGTTTTCTATGTGAAACAGTATTCACACAACACATACCACTGAACTCTTCACTTTCCCCCATTGTTCGTCCCACTTCATGGCCTTCACCTTCTGGTCGATTCGCATTCGGCTTTTACGAGCAAGGCGATGGCTTCAAAGTTGGAATCTTCTTGTTCAATGAGAATAATAAAACCATTGTTTGGACTGCATCTCGTGATGATCCTCCTGTATCCTCAAAAGCAAAGCTTGTTCTAACCATGAGAGGCGAGCTTCTTCTTCAAACAGGTCCAGGGCAAAATAAGGTTATTTCTCACGGTAACAATGGAACTGTTTCCTCTGCTTCCATGCTTGATTCTGGAAATTTTGTTCTGCGAAACAAAAATTCCGACATCCTTTGGCAGACTTTCGATCACCCAACTGATACTATATTAGGGGGTCAGATTCTAACTGGTGGGAGTGAATTGGTGTCTAGTTCATCAGACACCAACCAATCATCTGGAAGGTTTCAATTGGCCATGCAGAGTGATGGAAACCTTGTTCTGTATCCACGATATTATGGGAGCACAACTTGGGAGGCTTACTGGGCCTCTGATAGTTATCATGGATACAGTTCCAAATATTATCTTTTCCTCAACAACACAGATCCTCAGCCTCTATGTATTGTAAATGCCACTAGTTCCAACTCACAGATACTTTGGCAAGTGGATGATAGCAGCTTCGAAGGAAAAAACACTATTTATCGTGCAACAATTGATGCTGATGGAGTTTTTCGACTCTATGCTCATTATGAAGATGTAAATCGGACACGTCAAGTTAAAATGTTGTGGTCACCGCCAGAGTTGGACAATCTTTGTAAAGTGATGACTTTTTGTGGATTCAACAGCTATTGTACCACCAATGACAACCAGCCTTGTTGCTTTTGTCTTCCCGGAACTGATTTATTAGATCCAAGACAAACAAATCTTGGATGCAAAAGGAACTTCTCAGAAGTTGAATGTAGAGGTGGAGAAGATAATGCAAACTTTTATTACATGTCTCCCATGAGTAGTATGAAGATGAGTGATCTTCCTTATACAGAGGAAGACATTCCAGAGGAGGAATGCGCAGCTTCTTGTTTGCAAGATTGTTATTGTGGGGCTGCCTTTTATGATGATAATCGCTGCAAGAAACAAAAGCTTCCATTGAGATATGTTACAAGAGAATCACAAGAGTTGTCCTCCTTCACAATATACTTCAAGGTGGGACTTCATAGCCTGGAAAGCAGCAATGATAACCAACCATCTCCCATCAAGACTACCAGTAAGAAAGCAATTGAGGTGATCATTCTCATTGTCCTGGGTTTTGCTGTTCTTTTGTCTTCAGCTGTCGCAATCTCCGGCCGTTTAATTTTCAAGATTGGCGTTTTAAGTTACAGGAGGTTGTTGGAGATGGGAGATTTAGGTTTGAGCCAAGGGATTACTCTGAGGGTGTTTTCATACAATGAGCTGAAGAAAGCAACAAATGGTTTCAAACAAGAGGTGGGTAAGGGTTCGTTTGGATCAGTTTATAAAGGAACTTTACTCAAAGGAAGAAGACTTATTGCAGTAAAAAGGCTACACAGATTAATTGAAGAAGGAGAGAGAGAATTTCAAGCTGAGATGCAAGCCATTGGGAAAACCCACCACAAAAACTTAGTTCGCTTGCTGGGATATTGTGCTGAGGGATCTAAAAGGCTTCTAGTTTATGAGTTCATGAGTAATGGCTCCCTTGAGAAGTTTATCTTTGGTGACAGTACTGTTCGTCCTGATTGGGATCAGAGAAGAAAAATAGCACTAGACATTGCAAGAGGCTTACTGTATCTCCATGAACAATGCAGGGCTCCCATTATTCACTGTGACATAAAGCCTTCAAACATAGTGATGGATGAGTTTTTTACAGCTAAAATATCAGATTTTGGTTTGGCAAAACTTCTAATGCCAGATCAAACAAGAACCTTCACTCAAGTTAGAGGGACAAGAGGTTATTTGGCTCCAGAATGGAACAAGAACACTCCAATAACAGTGAAAGCAGATGTTTATAGCTATGGAGTTATGTTATTGGAGATTGTATTTTGCAGAAGAAGCTTAGTGGTTAACATTTCAAATCCAGAGCAAATTGTTCTGTCTAATTGGGTGTACAAGTGTTTTGTTCGGCGAGAGTTAAACAAGCTTGTTCTTGGGGAAGACGTGGACCTAACGATGCTAGAGAATTTGGTGAAAGTGGGGATATGGTGTATTCAAGATGAGCCTTTTCTTCGTCCATCAATGAAGAGTGTAGTGTTGATGCTTGAAGGAGTTACTGAGGTGGCTATCCCTCCTTGCCCATCTACTAATTCTACGTGA 2385 0.4071 MATIASSNIYFLFLVCFLCETVFTQHIPLNSSLSPIVRPTSWPSPSGRFAFGFYEQGDGFKVGIFLFNENNKTIVWTASRDDPPVSSKAKLVLTMRGELLLQTGPGQNKVISHGNNGTVSSASMLDSGNFVLRNKNSDILWQTFDHPTDTILGGQILTGGSELVSSSSDTNQSSGRFQLAMQSDGNLVLYPRYYGSTTWEAYWASDSYHGYSSKYYLFLNNTDPQPLCIVNATSSNSQILWQVDDSSFEGKNTIYRATIDADGVFRLYAHYEDVNRTRQVKMLWSPPELDNLCKVMTFCGFNSYCTTNDNQPCCFCLPGTDLLDPRQTNLGCKRNFSEVECRGGEDNANFYYMSPMSSMKMSDLPYTEEDIPEEECAASCLQDCYCGAAFYDDNRCKKQKLPLRYVTRESQELSSFTIYFKVGLHSLESSNDNQPSPIKTTSKKAIEVIILIVLGFAVLLSSAVAISGRLIFKIGVLSYRRLLEMGDLGLSQGITLRVFSYNELKKATNGFKQEVGKGSFGSVYKGTLLKGRRLIAVKRLHRLIEEGEREFQAEMQAIGKTHHKNLVRLLGYCAEGSKRLLVYEFMSNGSLEKFIFGDSTVRPDWDQRRKIALDIARGLLYLHEQCRAPIIHCDIKPSNIVMDEFFTAKISDFGLAKLLMPDQTRTFTQVRGTRGYLAPEWNKNTPITVKADVYSYGVMLLEIVFCRRSLVVNISNPEQIVLSNWVYKCFVRRELNKLVLGEDVDLTMLENLVKVGIWCIQDEPFLRPSMKSVVLMLEGVTEVAIPPCPSTNST 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01016 794 Gene3D - 148 294 - -
Accr8g01016 794 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 586 785 - -
Accr8g01016 794 SUPERFAMILY alpha-D-mannose-specific plant lectins 169 269 IPR036426 -
Accr8g01016 794 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 209 IPR036426 -
Accr8g01016 794 SMART blect_4 33 147 IPR001480 -
Accr8g01016 794 ProSiteProfiles Bulb-type lectin domain profile. 27 145 IPR001480 -
Accr8g01016 794 ProSitePatterns Serine/Threonine protein kinases active-site signature. 630 642 IPR008271 GO:0004672|GO:0006468
Accr8g01016 794 FunFam Serine/threonine-protein kinase 147 280 - -
Accr8g01016 794 CDD STKc_IRAK 515 779 - -
Accr8g01016 794 PIRSF SRK 1 794 IPR024171 GO:0004674
Accr8g01016 794 SUPERFAMILY Protein kinase-like (PK-like) 494 778 IPR011009 -
Accr8g01016 794 FunFam S-receptor-like serine/threonine-protein kinase 484 585 - -
Accr8g01016 794 ProSitePatterns Protein kinases ATP-binding region signature. 515 538 IPR017441 GO:0005524
Accr8g01016 794 ProSiteProfiles Bulb-type lectin domain profile. 148 280 IPR001480 -
Accr8g01016 794 CDD B_lectin 44 147 IPR001480 -
Accr8g01016 794 Gene3D - 24 145 IPR036426 -
Accr8g01016 794 ProSiteProfiles Protein kinase domain profile. 509 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01016 794 SMART serkin_6 509 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01016 794 Pfam D-mannose binding lectin 73 155 IPR001480 -
Accr8g01016 794 Gene3D Transferase(Phosphotransferase) domain 1 586 784 - -
Accr8g01016 794 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 39 789 - -
Accr8g01016 794 Gene3D Phosphorylase Kinase; domain 1 495 585 - -
Accr8g01016 794 Pfam Protein kinase domain 512 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01016 Accr-Chr8 26138774 26141158 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01016 499 787 Receptor kinase-like Gene Family AT5G20050 42.071 1.94e-68 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Accr8g01016 Pkinase 4.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01016 - - pcin:129309635 1080.86