Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00999 ATGTCGAGCTGCAACATGGACCTTGTGTCTGAGCAACTATGCTATATCCCCTGCAAATTTTGCAACATTGTTCTTGCGGTTAGTGTTCCATGCAGTAGTCTGTTTGACATCGTGACTGTCCGATGTGGTCACTGCACCAATCTATGGGCCGTCAACATGGCCGCCGCATTTCAGTCACTGTCATGGCAACAAGTTCAGGCTTCTGGGTTATCCAATCCAGAGTACAGAATTGAGACTGGTTCGTCTTCCAGATGCAATAATAGGATTGCAATGAGAGCCCCCACCACCACACGTAATTCAACTGAGGAAAGAGCTGCGACTAGGCCTCCCGAGAAGAGGCAGCGCGTACCTTCTGCATACAATCAGTTCATAAAAGAAGAGATTCAGAGGATCAAAGTCAATAACCCAGATATCAGTCACAGGGAGGCATTCAGTACTGCTGCAAAGAATTGGGCACATTTCCCTCACATTCATTTCGGGTTGATGCTGGAGACCAATAATCAAGCTAGGATTGGAAATTAA 522 0.4655 MSSCNMDLVSEQLCYIPCKFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWAVNMAAAFQSLSWQQVQASGLSNPEYRIETGSSSRCNNRIAMRAPTTTRNSTEERAATRPPEKRQRVPSAYNQFIKEEIQRIKVNNPDISHREAFSTAAKNWAHFPHIHFGLMLETNNQARIGN 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00999 173 CDD HMG-box_SF 115 151 - -
Accr8g00999 173 FunFam axial regulator YABBY 5-like 99 157 - -
Accr8g00999 173 PANTHER PROTEIN YABBY 6-RELATED 1 169 IPR006780 GO:0007275
Accr8g00999 173 MobiDBLite consensus disorder prediction 94 117 - -
Accr8g00999 173 SUPERFAMILY HMG-box 100 154 IPR036910 -
Accr8g00999 173 Gene3D High mobility group box domain 97 156 IPR036910 -
Accr8g00999 173 Pfam YABBY protein 10 161 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00999 Accr-Chr8 25572944 25576805 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00999 5 172 C2C2-YABBY Transcription Factor Family AT2G26580 73.810 1.60e-88 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Accr8g00999 YABBY 5.3e-68 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00999 K25796 - gmx:100499942 308.916