Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00990 ATGAATCTGAGCAACAATGTCAAGGGATCCATGTCAACGGCCAGTTCTAGTTCCGCTCTGAAATCCAGCGGTGACTGCGCCAGTGCCGTCGACCAGTTCCCGGCGGGGTTGCGGGTACTGGTGGTCGACGATGATCCTACTTGCCTTATGATCCTTGAGAAGATGCTTCATACTTGTCTCTACGAAGTAGCAAAATGCAAGAGAGCTGAAGTTGCATTGTCTCTTCTGAGAGAGAACAAAAATGGGTTCGACATAGTTATAAGCGATGTGCATATGCCAGACATGGATGGCTTACTTGTTGATGAGAATGGGAGAAAGAGCAGTTTGCGGCTGTAG 336 0.4851 MNLSNNVKGSMSTASSSSALKSSGDCASAVDQFPAGLRVLVVDDDPTCLMILEKMLHTCLYEVAKCKRAEVALSLLRENKNGFDIVISDVHMPDMDGLLVDENGRKSSLRL 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00990 111 PANTHER TWO-COMPONENT RESPONSE REGULATOR 37 98 IPR045279 GO:0009736
Accr8g00990 111 Gene3D - 16 107 - -
Accr8g00990 111 ProSiteProfiles Response regulatory domain profile. 38 111 IPR001789 GO:0000160
Accr8g00990 111 SUPERFAMILY CheY-like 36 98 IPR011006 -
Accr8g00990 111 Pfam Response regulator receiver domain 39 99 IPR001789 GO:0000160
Accr8g00990 111 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00990 Accr-Chr8 25184421 25185145 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00990 27 103 Response Regulator Gene Family AT4G16110 77.922 1.60e-35 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Accr8g00990 Response_reg 1.9e-12 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00990 - K14491 gmx:100781102 140.584