Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00977 ATGGGTTCCTATGAACAGCCATCAGCAGGCGGCGGCGCCTCCTCCAATGGTAGCTCCTCGAGCTCTGGAACCAGGCCGGCGGAGATGGATGGCCTTCTAGCAGGCGCTGGTTACAAGGTCAAAGCGGCGGAGCTCCATCAAGTGGCTCGGCGCATCGAACGGCTCGAGAATGTCATGGTCAACTCCGCCGCGGACATTTCTCATCTAGCTTCCGATACAGTACACTATGACCCCGCCGATATCGGCTCTTGGGTTGACACTCTACTCACTGAATTGAACCAGACCGTTTCTCTGCCGTGTGATCTGTTGGAGTTGCCGGATCTCCCAACTTGTCCGTTGCTTGATGAAACGACGACGCTTGATAATCGGTGGGTGGTGGGTCAGAACGATCAGAGCCACCATAGCCTCACTCCTCAGCAGCAGCAATTTCAGCAATTGACGGTGGTAACATCGATGGAAGAGAACTCCGGGATAAGGCTGGTCCACATGTTGATGACCTGTGCTGATTCTCTTCAACGTGGCGAGCTAGCTCTTGCCGGCTCGCTTATTGAGGACATGCAGGGTTTGTTGGCGCACGTGAACACCAGCTGTGGCATCGGAAAAGTCGCCGGATACTTCATCGACGCCCTCAGCCGCCGGATCTTCGCTGCAGGGACCATTGGCACTGGCTCCTCCTCCTCCTACTGCACCGGCTCGCCTTCTGAGGATGAGGTTTTGTACCATCACTATTACGAGGCTTGCCCTTACCTCAAGTTCGCTCACTTCACGGCGAACCAAGCCATCTTGGAGGCCTTTAACGGCCACGATTGCGTCCACGTCATCGACTTCAACCTCATGCACGGCCTCCAGTGGCCAGCCTTGATTCAAGCTCTGGCTCTCCGTCCCGGTGGTCCCCCCTTACTGAGGTTGACCGGCATTGGCCCGCCATCTCCGGACGGCCGTGACACTCTCCGCGAAATTGGACTGAAACTCGCTGAGTTAGCTCGGTCTGTCAACGTCCGATTCGCTTTCCGTGGAGTGGCGGCTTCCAGACTCGAAGACGTCAAGCCATGGATGCTCCAGGTAAGCCCAAAAGAAGCTGTGGCGGTGAATTCCATCATGCAGCTTCACCGCCTCCTCGGATCCGACCCGACAAGAGAACCCGCAATCCAATCCGTCCTTACCTGGATCCGAAGCTTGAACCCGAAAATCATGACGGTGGTGGAGCAAGAAGCGAATCATAACCAACCCCGGTTCTTAGACCGGTTCACGGAAGCTCTGTATTACTACTCGACCATGTTTGACTCGCTTGAGGCTTGCTCGCTCCAGCCGGATAAAGCCTTAGCCGAGATATACATACAGAAGGAGATATGCAACGTTGTGTGCTGTGAGGGATCGGCTCGCTTGGAGCGGCACGAACCGCTGGCTAAGTGGAGAGATCGGCTCACTGAAGCCGGCTTTAGGGCTCTACATTTGGGATCAAATGCCTTCAAGCAAGCCAGCATGCTTTTGACTCTGTTCTCAGTTGAAGGTTATTGCGTGGAAGAGAACGAAGGATGTTTGACTTTGGGTTGGCATAGCCGACCCCTCATTGCGGCTTCGGCTTGGCAAGCTGCACCAGAGTATGAAGTGGCTTAA 1617 0.5523 MGSYEQPSAGGGASSNGSSSSSGTRPAEMDGLLAGAGYKVKAAELHQVARRIERLENVMVNSAADISHLASDTVHYDPADIGSWVDTLLTELNQTVSLPCDLLELPDLPTCPLLDETTTLDNRWVVGQNDQSHHSLTPQQQQFQQLTVVTSMEENSGIRLVHMLMTCADSLQRGELALAGSLIEDMQGLLAHVNTSCGIGKVAGYFIDALSRRIFAAGTIGTGSSSSYCTGSPSEDEVLYHHYYEACPYLKFAHFTANQAILEAFNGHDCVHVIDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDTLREIGLKLAELARSVNVRFAFRGVAASRLEDVKPWMLQVSPKEAVAVNSIMQLHRLLGSDPTREPAIQSVLTWIRSLNPKIMTVVEQEANHNQPRFLDRFTEALYYYSTMFDSLEACSLQPDKALAEIYIQKEICNVVCCEGSARLERHEPLAKWRDRLTEAGFRALHLGSNAFKQASMLLTLFSVEGYCVEENEGCLTLGWHSRPLIAASAWQAAPEYEVA 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00977 538 MobiDBLite consensus disorder prediction 1 26 - -
Accr8g00977 538 Gene3D - 28 92 IPR038088 -
Accr8g00977 538 ProSiteProfiles GRAS family profile. 151 530 IPR005202 -
Accr8g00977 538 Pfam Transcriptional regulator DELLA protein N terminal 30 95 IPR021914 -
Accr8g00977 538 Pfam GRAS domain family 160 530 IPR005202 -
Accr8g00977 538 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 150 526 IPR005202 -
Accr8g00977 538 SMART DELLA_2 30 102 - -
Accr8g00977 538 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00977 Accr-Chr8 24767417 24769033 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00977 29 530 GRAS Transcription Factor Family AT1G14920 49.421 1.80e-164 476
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Accr8g00977 GRAS 5.3e-126 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00977 K14494 - qsa:O6P43_002319 766.918