Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00974 ATGTTTGGAAGAAGAAACAGAGAGAGGTTTAAGGTAGGGGTGCCTGGACAACAAGAGCTTGAATTGTGCAGGGATGGAAGCCAATACAATCTCTCTACCGGCATATTACCTTCCCTCGGTGGTCGGAGCTACCGGCGGAGCTTCCTTCGTCCGTTCATTATCTCCCCCTACGACCGCCGTTACAAGATATGGCAGAATTTTCTGGTGATTCTGGTCCTATACACGGCGTGGGTATCTCCATTTGAGGTCGGATTCCTTAAGGAACCTGTGACACAACCACTCTCCATTGTAGACAATGTTGTCAATGGATTCTTCGCAATCGACATAATTCTCACCTTCTTCGTTGCTTTTCTTGACAAAGCGTCCTACTTATTAGTGGATAGCTACAGAAGAATCGCCTTGAAATACACAAGTTCTTGGTTGTTCTTTGATCTTATCTCTACCATTCCTTCCGAACTCGCTTATCAAATCTCCCCTTCTCCACTTAAATCCTATGCATTCTTCAACATACTTCGCCTCTGGCGTCTCCGAAGAGTTGGTGCTCTGTTTTCTAGATTGGAGAAGGACAAGAGCTATAATTATTTATGGGTTCGTTGTCTTAAGCTTATATATGTTACGCTTTTTGCTGTTCACTGTGGTGGATGCTTCAATTATCTTCTTGCTACTCTGTATCATGATCCCAAAAAGACATGGTTGGGAGTACAAATGGGGGAAGATTTTAAGGAACAAAGCTTGTGGTCTAGATATGTGATTTCTATATACTGGTCTATTACAACCTTAACAACTGTGGGCTATGGAGATTTGCATCCAGTGAATTCCTGGGAGATGATCTTTGACATCTTATATATGTTCTTTAACCTGGGATTAACGGCTTATTTGATTGGTAACATGACCAATCTGGTTGTCCATTTCACAAGTCGAACCAGAGACTTTAGGGATACCATACAAGCGGCAGCAAGCTTTGCACAGAGGAATCAATTGCCGGTTAGGCTGCAAGATCAGATGATAGCACATTTGTGTTTGAAGTTCAGAACAGATTCAGAGGGGTTACAGCAGCAAGAGACACTTGATTCTCTTCCTAAAGCCATAAGATCAAGCATTTCTCACTACCTCTTCTATTCTCTAGTGGACAAGGTTTATTTATTTCGTGGGGTCTCTAATGACTTGCTTTTCCAACTGGTGTTGGAAATGAAAGCGGAGTATTTTCCTCCCAAAGAAGACGTCATCTTGCAAAATGAAGGTCCCACAGATTTCTACATTCTAGCCACTGGTGCTGTGGAGCTGATTGTTATGAAAAATGGGGTAGAGCAAGTGGTGGGGGAGGCAACCAGTGGTGGTTTGTGTGGTGAGATAGGGGTACTCTGTTATAGGCCACAACTCTTCACCGTGCGAACCAAGCGATTGAGCCAACTTCTCCGGCTGAATCGCGCAACCTTCCTCAACATTGTGCAGACCAACATTGGAGACGGCACCATAATCGTCAACAATCTCCTTGAGCATTTGAAGGAACAAAGTGACCCAATGATAAAGGGAGTGTTGGTGAAGATAGAGAACATGCTTGCTCGTGGAAGGATGGACCTACCTCTTAGCCTCTGCTTCACCACTCTAAGAGATGACGACTTGATGTTACATCAGTTGTTGAAACGAGGCTTGGATCCTGACGAATCTGACAACACTGGAAGAACTGCCCTCCATGTTGCAGCGTCTAAAGGAAGTGAGAACTGTGCCGTGCTTCTATTGGATTACGGAGCTGATCCTAACGTAAAAGATTGTGAAGGGAATGTACCATTATGGGAAGCAATTCTGGGTGGTCACCAACCAGTGGTGAAGCTTTTAGCAGAAAATGGAGCGTCCTTAGAATTTGGAGAAGTGGGTCATTTTGCTTGCACTGCAGCAGAACAGAACAACCTTAGCTTGCTCAAGGACATAGTCCAATATGGAGGAGACGTCACACTTGCTAGGACCGACAATGGAACCACGGCCCTCCACGTGGCGATCTCTGAGGCCAACATGGAGATCATCAAGTTCCTGCTAGATCATGGTTCCGACATAGACAAACCAGATAAGGAAGGTTGGACGCCAAGAGGACTTGCAGACCAACAAGGACATGAAGAGATCAAAGACATTTTTGCATCTTCAGGGGAGCCCAATAATAAAGCTCAACATGTTGTAGCCATTCCTCAGGGACAACCGAGTACAAAGATCGGGAGGTTCACTAGCAAGCCTGCCATACCGGTGGCCCCACAAGACGGTAATGACCAGTCATGGGGCGCGGGCAGCCAGAGCAGCAGGCCGAGGACAAGGAGGAGGACGAGTAATTTTCATAATTCTCTGTTTGGGATCATGTCGGCTGTTCGCAAGGGGAAGAACATGGAGGGTTTGACGTTTGACAGTTGTAATGGAGGAGAATGTTTGGCTGCTAGAGTTACTATTACTTGTCCGGAGAAAGGCGACGTGGGAGGGAGGCTTGTGCTTTTGCCTAAGAGCCTAAAGGAGCTGATTGATATTGGAATTAAGAAATTTGGACTGGTTCATGATAATGTTAAGGTTCAGAACAAAGAAGGTGCTCAGATTGATGATATTGAAGTTGTTAGAGATGGTGATTATCTTGTTTTTGTCTCTGTTGGTGGTCTCATGCGTCAATCCAGTTGCCCAGCAGAACCACATCAAAAGGACATGGTTTTGTAG 2688 0.452 MFGRRNRERFKVGVPGQQELELCRDGSQYNLSTGILPSLGGRSYRRSFLRPFIISPYDRRYKIWQNFLVILVLYTAWVSPFEVGFLKEPVTQPLSIVDNVVNGFFAIDIILTFFVAFLDKASYLLVDSYRRIALKYTSSWLFFDLISTIPSELAYQISPSPLKSYAFFNILRLWRLRRVGALFSRLEKDKSYNYLWVRCLKLIYVTLFAVHCGGCFNYLLATLYHDPKKTWLGVQMGEDFKEQSLWSRYVISIYWSITTLTTVGYGDLHPVNSWEMIFDILYMFFNLGLTAYLIGNMTNLVVHFTSRTRDFRDTIQAAASFAQRNQLPVRLQDQMIAHLCLKFRTDSEGLQQQETLDSLPKAIRSSISHYLFYSLVDKVYLFRGVSNDLLFQLVLEMKAEYFPPKEDVILQNEGPTDFYILATGAVELIVMKNGVEQVVGEATSGGLCGEIGVLCYRPQLFTVRTKRLSQLLRLNRATFLNIVQTNIGDGTIIVNNLLEHLKEQSDPMIKGVLVKIENMLARGRMDLPLSLCFTTLRDDDLMLHQLLKRGLDPDESDNTGRTALHVAASKGSENCAVLLLDYGADPNVKDCEGNVPLWEAILGGHQPVVKLLAENGASLEFGEVGHFACTAAEQNNLSLLKDIVQYGGDVTLARTDNGTTALHVAISEANMEIIKFLLDHGSDIDKPDKEGWTPRGLADQQGHEEIKDIFASSGEPNNKAQHVVAIPQGQPSTKIGRFTSKPAIPVAPQDGNDQSWGAGSQSSRPRTRRRTSNFHNSLFGIMSAVRKGKNMEGLTFDSCNGGECLAARVTITCPEKGDVGGRLVLLPKSLKELIDIGIKKFGLVHDNVKVQNKEGAQIDDIEVVRDGDYLVFVSVGGLMRQSSCPAEPHQKDMVL 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00974 895 Gene3D - 528 711 IPR036770 -
Accr8g00974 895 PRINTS EAG/ELK/ERG potassium channel family signature 249 266 IPR003938 GO:0005249|GO:0006813|GO:0016020
Accr8g00974 895 PRINTS EAG/ELK/ERG potassium channel family signature 74 81 IPR003938 GO:0005249|GO:0006813|GO:0016020
Accr8g00974 895 PRINTS EAG/ELK/ERG potassium channel family signature 98 108 IPR003938 GO:0005249|GO:0006813|GO:0016020
Accr8g00974 895 PRINTS EAG/ELK/ERG potassium channel family signature 109 118 IPR003938 GO:0005249|GO:0006813|GO:0016020
Accr8g00974 895 PRINTS EAG/ELK/ERG potassium channel family signature 275 286 IPR003938 GO:0005249|GO:0006813|GO:0016020
Accr8g00974 895 PRINTS EAG/ELK/ERG potassium channel family signature 293 302 IPR003938 GO:0005249|GO:0006813|GO:0016020
Accr8g00974 895 SMART ANK_2a 524 555 IPR002110 GO:0005515
Accr8g00974 895 SMART ANK_2a 657 686 IPR002110 GO:0005515
Accr8g00974 895 SMART ANK_2a 592 621 IPR002110 GO:0005515
Accr8g00974 895 SMART ANK_2a 559 588 IPR002110 GO:0005515
Accr8g00974 895 SUPERFAMILY Ankyrin repeat 538 713 IPR036770 -
Accr8g00974 895 Gene3D Jelly Rolls 345 507 IPR014710 -
Accr8g00974 895 PANTHER POTASSIUM CHANNEL AKT1 27 873 IPR045319 GO:0005249|GO:0006813
Accr8g00974 895 FunFam Potassium channel KAT3 63 303 - -
Accr8g00974 895 ProSiteProfiles Ankyrin repeat profile. 592 624 IPR002110 GO:0005515
Accr8g00974 895 Pfam Ion transport protein 62 308 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Accr8g00974 895 SUPERFAMILY cAMP-binding domain-like 306 501 IPR018490 -
Accr8g00974 895 SUPERFAMILY Voltage-gated potassium channels 56 302 - -
Accr8g00974 895 ProSiteProfiles cAMP/cGMP binding motif profile. 381 483 IPR000595 -
Accr8g00974 895 Pfam Ankyrin repeats (3 copies) 542 619 IPR002110 GO:0005515
Accr8g00974 895 Pfam Ankyrin repeats (3 copies) 631 718 IPR002110 GO:0005515
Accr8g00974 895 Pfam KHA, dimerisation domain of potassium ion channel 808 872 IPR021789 -
Accr8g00974 895 ProSiteProfiles Ankyrin repeat region circular profile. 657 689 - -
Accr8g00974 895 ProSiteProfiles Ankyrin repeat region circular profile. 559 590 - -
Accr8g00974 895 ProSiteProfiles Ankyrin repeat profile. 559 591 IPR002110 GO:0005515
Accr8g00974 895 FunFam Potassium channel KAT2 369 505 - -
Accr8g00974 895 SMART cnmp_10 381 498 IPR000595 -
Accr8g00974 895 MobiDBLite consensus disorder prediction 753 772 - -
Accr8g00974 895 ProSiteProfiles Ankyrin repeat profile. 657 689 IPR002110 GO:0005515
Accr8g00974 895 ProSiteProfiles Ankyrin repeat region circular profile. 592 620 - -
Accr8g00974 895 Gene3D - 62 303 - -
Accr8g00974 895 CDD CAP_ED 381 486 IPR000595 -
Accr8g00974 895 ProSiteProfiles KHA domain profile. 808 890 IPR021789 -
Accr8g00974 895 MobiDBLite consensus disorder prediction 727 772 - -
Accr8g00974 895 PRINTS Ankyrin repeat signature 673 687 IPR002110 GO:0005515
Accr8g00974 895 PRINTS Ankyrin repeat signature 560 575 IPR002110 GO:0005515
Accr8g00974 895 Pfam Cyclic nucleotide-binding domain 401 486 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00974 Accr-Chr8 24636445 24643276 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00974 21 872 Ion Channels AT2G25600 60.279 0.0 1043
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00974 K21867 - csv:101220784 1264.98