Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00973 ATGATAGGAAGCAGAAACAGAGGCGTGTTTAGTGTAGGTGTGTGTGGGCAAGAAGAGCTTGAATTGTCTAGAGATGGCAGCCAATACAGTCTTTCTACCGGCCTATTACCTTCCCTTGGTGGCCAGAGCAACCGCCGGAACACCCTTCGTCCGTTCATTATCTCCCCCTACGACCGCCGTTACAGGGTATGGGAGACTTTTCTGGTGATTCTTGTGATATACACTGCATGGGTATCACCATTTGAGTTCGGATTCCTTAAGGAACCCGTGAGACCACTCTCGATTGCCGACAATGTTGTCAATGGATTCTTTGCAATCGACATAGTTCTCACCTTCTTCGTTGCTTATCTTGACAAAGCCTCCTACTTACTTGTGGATAGTCACAGAAGAATCGCCTGGAAGTATACAAGTTCTTGGTTAATATTTGATGTTATCTCCACCATCCCTTCGGAACTCATTCACAAAATCTCCCCTTCTCCCCTTAAATCCTATGGATTCTTCAATATGCTTCGCCTCTGGCGTCTCCGGAGGGTCAGTGCTCTGTTTTCTAGAATGGAGAAGGACAAGAGCTATAACTATTTCTGGGTTCGTTGTGTTAAGCTTATATGTGTTACACTTTTTGCAGTTCATTGTGCTGGATGCTTCTATTATCTTCTTGCTGCTAGGTATCATGATCCCGAAAAGACGTGGTTGGGAGAACAAATGGGGGCAGATTTTGAGAAACAGAGTTTGTGGTCTAGATATGTGATTTCTATATACTGGTCTATTACAACCTTAACAACTGTTGGCTATGGAGATTTGCATCCTGTCAATTCCAGGGAGATGATCTTCGACATCTTTTATATGCTCTTTAATCTGGGATTAACTGCGTATTTGATCGGTAACATGACCAACCTGGTCGTCCATTTCACCAGTCGAACCAGGCAATTTAGGGATACCATACAAGCCGCAGCAAGCTTTGCACAGAGGAACCGGTTGCCGGTTCGGCTGCAAGATCAGATGATAGCACATTTGTGTTTGAAGTTCAGAACAGATTCAGAGGGATTACAGCAGCAAGAGACACTTGATTCTCTTCCTAAAGCCATAAGATCAAGCATTTCCCATTACCTCTTCTATTCTCTGGTGGATAAGGTTTATTTATTTCGTGGGGTCTCTAATGACTTGCTTTTCCAACTGGTGTCAGAAATGAAAGCAGAGTATTTTCCTCCCAAAGAAGACGTCATCTTGCAAAATGAAGCTCCCACAGATTTCTATATCCTAGCGACTGGTGCTGTGGAGCTGTTAGTTATGAAAAATGGTGTAGAGCAGTTGGTGGGAGAGGCAACTAGTGGTGATCTTTGTGGTGAAATAGGGGTACTCTGTTATAGGCCACAACTCTTCACCGTGCGAACCAAGCGTTTGAGCCAACTTCTTCGGCTGAACCGTGCCACCTTCCTCAATATAGTGCAAGCCAATGTTGGAGATGGCTCCATAATCATCAACAACCTCCTTGAGCATTTGAAGGAACAAAGTGACCCAATGATGAAGGGAGTGTTGGTGGAGACAGAGAACATGCTTGCTCGTGGAAGGATGGACCTACCCCTCAGCCTTTGCTTCGCCACTTTCAGAGGAGATGACTTGATGTTACATCAGTTGTTGAAACGTGGCTTCGATCCTAATGAATCCGACAACAATGGAAGAACTCCTCTCCATATTGCAGCATCTAAAGGAAGTGAGAACTGTGCCCTGCTTCTATTGGATTATGGAGCTGATCCTAACGTAAGAGATTGTGAAGGGAGTGTACCATTATGGGAAGCAATTCTGGGTGGTCACCAACCAGTGGTGAAGCTTTTAGCAGAAAATGGAGCTTCCTTAAAATTTGGAGATGTGGGTCATTTTGCTTGCACTGCAGCAGAACAGAACAACCTTAGCTTGCTCAAGGACATAGTCCGATATGGAGGAGATGTCACCCTTCCTAGGACCCACAATGGAACCACGGCCCTCCACTTGGCGGTCTCCGAGGCCAACGCTGAGATCGTGAAGTTCCTGCTGGATCATGGCTCCGACATAGACAAACCAGATAAGGAAGGTTGGACCCCAAGAGAGCTTGCAGACCAACAAGGTCATGAAGAGATCAAAGCCATTTTTGCATCCTCAAGGGAGCCCAATAATGAAGCTCAATTTGTTGCAGCAGCCATTCCTGAGAGACAACCAGGTACAAAGATTAGGTACCTAGGGAGGTTCACTAGTGAGCCGTCCATGCCCTTCGCCCCACGAGATGGTAACGACCGGTCATGGGGTGGTGGTGGCCGGAGCAGTAGGCCGAGGAGGAGGACGTGTAATTTTAATAATTCTTTGTTTGGGTTCATGTCTGTTGCTCACAAGGGGGAAAACATGGAGGATTTGATTTTCGGTGTTAATAATAATGAGGACAAGTGTGCAAGGAATAATGGTGTTGGTAGTAATGGAGGTGGAGGAGGGTGTTTGGCTGCTAGAGTTACCATTACTTGTCCGGAGAAAGGCGATGTGGGAGGGAGGCTTGTGCTTTTGCCCAAGAGCCTAAAGGAGCTAATTGAGACTGGAGTTAAGAAATTTGGGTTGCTTCATGATAATGTGAAGGTTCTAAATAATGATGGGGCTCAGATTGATGATATTGATGTTGTTAGAGATGGTGATCATCTTGTTTTTGTCTCTGTCGGTGGTTTCATGCGTCAATCCAGTTGCCCAGAACCACCTGAAAACAATGTCGTCTGA 2733 0.4566 MIGSRNRGVFSVGVCGQEELELSRDGSQYSLSTGLLPSLGGQSNRRNTLRPFIISPYDRRYRVWETFLVILVIYTAWVSPFEFGFLKEPVRPLSIADNVVNGFFAIDIVLTFFVAYLDKASYLLVDSHRRIAWKYTSSWLIFDVISTIPSELIHKISPSPLKSYGFFNMLRLWRLRRVSALFSRMEKDKSYNYFWVRCVKLICVTLFAVHCAGCFYYLLAARYHDPEKTWLGEQMGADFEKQSLWSRYVISIYWSITTLTTVGYGDLHPVNSREMIFDIFYMLFNLGLTAYLIGNMTNLVVHFTSRTRQFRDTIQAAASFAQRNRLPVRLQDQMIAHLCLKFRTDSEGLQQQETLDSLPKAIRSSISHYLFYSLVDKVYLFRGVSNDLLFQLVSEMKAEYFPPKEDVILQNEAPTDFYILATGAVELLVMKNGVEQLVGEATSGDLCGEIGVLCYRPQLFTVRTKRLSQLLRLNRATFLNIVQANVGDGSIIINNLLEHLKEQSDPMMKGVLVETENMLARGRMDLPLSLCFATFRGDDLMLHQLLKRGFDPNESDNNGRTPLHIAASKGSENCALLLLDYGADPNVRDCEGSVPLWEAILGGHQPVVKLLAENGASLKFGDVGHFACTAAEQNNLSLLKDIVRYGGDVTLPRTHNGTTALHLAVSEANAEIVKFLLDHGSDIDKPDKEGWTPRELADQQGHEEIKAIFASSREPNNEAQFVAAAIPERQPGTKIRYLGRFTSEPSMPFAPRDGNDRSWGGGGRSSRPRRRTCNFNNSLFGFMSVAHKGENMEDLIFGVNNNEDKCARNNGVGSNGGGGGCLAARVTITCPEKGDVGGRLVLLPKSLKELIETGVKKFGLLHDNVKVLNNDGAQIDDIDVVRDGDHLVFVSVGGFMRQSSCPEPPENNVV 910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00973 910 Pfam Ion transport protein 62 307 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Accr8g00973 910 SUPERFAMILY Voltage-gated potassium channels 56 301 - -
Accr8g00973 910 ProSiteProfiles Ankyrin repeat region circular profile. 591 618 - -
Accr8g00973 910 ProSiteProfiles Ankyrin repeat region circular profile. 656 688 - -
Accr8g00973 910 PRINTS Ankyrin repeat signature 559 574 IPR002110 GO:0005515
Accr8g00973 910 PRINTS Ankyrin repeat signature 672 686 IPR002110 GO:0005515
Accr8g00973 910 SMART ANK_2a 558 587 IPR002110 GO:0005515
Accr8g00973 910 SMART ANK_2a 525 554 IPR002110 GO:0005515
Accr8g00973 910 SMART ANK_2a 591 620 IPR002110 GO:0005515
Accr8g00973 910 SMART ANK_2a 656 685 IPR002110 GO:0005515
Accr8g00973 910 SMART ANK_2a 622 651 IPR002110 GO:0005515
Accr8g00973 910 Gene3D Jelly Rolls 344 506 IPR014710 -
Accr8g00973 910 ProSiteProfiles Ankyrin repeat profile. 591 623 IPR002110 GO:0005515
Accr8g00973 910 PRINTS EAG/ELK/ERG potassium channel family signature 248 265 IPR003938 GO:0005249|GO:0006813|GO:0016020
Accr8g00973 910 PRINTS EAG/ELK/ERG potassium channel family signature 97 107 IPR003938 GO:0005249|GO:0006813|GO:0016020
Accr8g00973 910 PRINTS EAG/ELK/ERG potassium channel family signature 274 285 IPR003938 GO:0005249|GO:0006813|GO:0016020
Accr8g00973 910 PRINTS EAG/ELK/ERG potassium channel family signature 292 301 IPR003938 GO:0005249|GO:0006813|GO:0016020
Accr8g00973 910 PRINTS EAG/ELK/ERG potassium channel family signature 74 81 IPR003938 GO:0005249|GO:0006813|GO:0016020
Accr8g00973 910 PRINTS EAG/ELK/ERG potassium channel family signature 108 117 IPR003938 GO:0005249|GO:0006813|GO:0016020
Accr8g00973 910 FunFam Potassium channel SKOR 62 301 - -
Accr8g00973 910 Pfam KHA, dimerisation domain of potassium ion channel 825 889 IPR021789 -
Accr8g00973 910 PANTHER POTASSIUM CHANNEL AKT1 27 890 IPR045319 GO:0005249|GO:0006813
Accr8g00973 910 SUPERFAMILY Ankyrin repeat 530 710 IPR036770 -
Accr8g00973 910 SUPERFAMILY cAMP-binding domain-like 305 500 IPR018490 -
Accr8g00973 910 ProSiteProfiles Ankyrin repeat profile. 656 688 IPR002110 GO:0005515
Accr8g00973 910 FunFam Potassium channel KAT2 368 504 - -
Accr8g00973 910 MobiDBLite consensus disorder prediction 743 770 - -
Accr8g00973 910 Gene3D - 526 710 IPR036770 -
Accr8g00973 910 ProSiteProfiles Ankyrin repeat region circular profile. 558 589 - -
Accr8g00973 910 SMART cnmp_10 380 497 IPR000595 -
Accr8g00973 910 Pfam Cyclic nucleotide-binding domain 400 484 IPR000595 -
Accr8g00973 910 Gene3D - 63 302 - -
Accr8g00973 910 ProSiteProfiles Ankyrin repeat profile. 558 590 IPR002110 GO:0005515
Accr8g00973 910 ProSiteProfiles cAMP/cGMP binding motif profile. 380 482 IPR000595 -
Accr8g00973 910 CDD CAP_ED 380 485 IPR000595 -
Accr8g00973 910 ProSiteProfiles KHA domain profile. 825 907 IPR021789 -
Accr8g00973 910 Pfam Ankyrin repeats (3 copies) 531 619 IPR002110 GO:0005515
Accr8g00973 910 Pfam Ankyrin repeats (3 copies) 630 707 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00973 Accr-Chr8 24574731 24583189 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00973 21 892 Ion Channels AT4G32500 61.162 0.0 1085
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00973 K21867 - qsa:O6P43_023045 1354.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g00973 8 24574731 24583189 Accr8g00973 8 24574731 24583189 ECH