Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00971 ATGGAGGACAGAACAGTGAACACAATCGCTGTAGTATTAGTGATTGCTCTGACCACTGTCGTCGTCATAGCTCGCTTCTTCTTAAAGCGTTCAAAAGCCTTCTTCTTGATCCTGGGGGCCGATGTCGCCGTGATCTTCGCGGTATTCGCCTGCGTTCTAATCCGATTCCGATACAACCGCAGAAGAAGACTTTTAGAATCCCAATACAAATCTGAAGGTAGAGAGCTCCGAATAGAGTACAGCTTCTTGCGAAAAGTCGCCGGAGTTCCAATTAAGTTCCGATTCCAAGAGCTTGAAGACGCCACCGACAGATTCCAGTCGCTACTCGGTGAAGGAGCCTCAGCTTCAGTCTTCAAAGGTATTTTAAATGACGGCACGTTGGTCGCCGTCAAGAGAATCAACGGCGATCAACGAGCCGAGAAGGAGTTCAAATCGGAAGTCGCCGCCATAGCCAGCGTCCAGCACGTCAACCTTGTGCGGCTGATCGGGTACTGCAACTCCGCCGGCAAGGACCCAAGATACTTGGTTTATGAGTGCATCCCAAATGGATCTTTAGATTCCTGGATATTCCCCACTAAAACCACCGAAAATCGCCGAAGATCTCGCCGCGGGTTCTTATCATGGAGCCTGAGATACAGAGTCGCCATTGATGTAGCCAAAGCTCTGTCTTACCTCCACCATGATTGCCGATCGAAGGTCCTCCACCTGGACGTAAAACCAGAGAACATTCTATTAGACGAGAATTTCAAAGCCGTCGTCTCCGACTTCGGCCTCTCGAAGCTGATGGGGAAAGACGAGAGCGAAGTGATGACGACAGTGAGAGGAACAAGAGGATATCTAGCACCAGAATGGCTCTTAGAGCACGGAGTTTCAGAGAAAACAGATATATACAGTTACGGAATGGTACTGTTAGAGATAATCGGAGGAAGAAGAAATGTGAGATGGATCCAAGATCCAAGGGACAAGGCGAAGAAGAAGTCTGAGTACTTTCCGAAGATGGTGAACGAGAAGGTGAGGGAAGGGAAAGTAATGGACATATTGGATCAGAGGTTGGTTGAAGATGGTGGTGGTGGAGGAGGAGTGGAAGAGAGAGAAGTGAAGAGGTTGGTTTATGTGGCACTTTGGTGCATACAAGAGAGGCCAAGAGTGAGGCCAAGTATGAAACATGTGGTTGATATGCTTGAAGGGAGAGAGAAAGTGGAGGAGCCACCTGATACGAGGATGGTTATGGGTAATTTTCTTTCAGTGGAAGGAGAAGATGAAGGAGAAGGATGCAACAACAGTAGTAATGGCACAAGATTGGGTAATTATTTGGCGAGTCAGAGGGCAATAGTAGGGAGGAATTTGGAATATGGATCCACTTATTCTATGGCCACCACTGTTCTGTCAGGCAGATAG 1398 0.48 MEDRTVNTIAVVLVIALTTVVVIARFFLKRSKAFFLILGADVAVIFAVFACVLIRFRYNRRRRLLESQYKSEGRELRIEYSFLRKVAGVPIKFRFQELEDATDRFQSLLGEGASASVFKGILNDGTLVAVKRINGDQRAEKEFKSEVAAIASVQHVNLVRLIGYCNSAGKDPRYLVYECIPNGSLDSWIFPTKTTENRRRSRRGFLSWSLRYRVAIDVAKALSYLHHDCRSKVLHLDVKPENILLDENFKAVVSDFGLSKLMGKDESEVMTTVRGTRGYLAPEWLLEHGVSEKTDIYSYGMVLLEIIGGRRNVRWIQDPRDKAKKKSEYFPKMVNEKVREGKVMDILDQRLVEDGGGGGGVEEREVKRLVYVALWCIQERPRVRPSMKHVVDMLEGREKVEEPPDTRMVMGNFLSVEGEDEGEGCNNSSNGTRLGNYLASQRAIVGRNLEYGSTYSMATTVLSGR 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00971 465 Gene3D Transferase(Phosphotransferase) domain 1 180 411 - -
Accr8g00971 465 ProSiteProfiles Protein kinase domain profile. 103 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g00971 465 SMART serkin_6 103 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g00971 465 PANTHER OS07G0415500 PROTEIN 34 406 - -
Accr8g00971 465 ProSitePatterns Serine/Threonine protein kinases active-site signature. 233 245 IPR008271 GO:0004672|GO:0006468
Accr8g00971 465 Gene3D Phosphorylase Kinase; domain 1 67 178 - -
Accr8g00971 465 FunFam Putative receptor-like protein kinase 180 402 - -
Accr8g00971 465 SUPERFAMILY Protein kinase-like (PK-like) 86 395 IPR011009 -
Accr8g00971 465 Pfam Protein kinase domain 107 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g00971 465 FunFam Putative receptor-like protein kinase 70 179 - -
Accr8g00971 465 ProSitePatterns Protein kinases ATP-binding region signature. 109 131 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00971 Accr-Chr8 24467860 24469257 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00971 1 406 Receptor kinase-like Gene Family AT5G20050 62.654 1.16e-173 493
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Accr8g00971 Pkinase 1.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00971 - - vra:106757544 595.119