Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00950 ATGGTTTCCAAAAGATACAGTTCCTCATATTACACAAAGGAGTTCTTAACTTTACTCTTGCTGTTCCTATTTAGCTTCCAGAACAGTACTGTTGAGTGCCAGGGAAGGTTGAATAAACAGAACTATTCAGAATCAGAAACTGAGTATCCATCAAGGCCTTCACAAGATAAGGAAGACTTGCGCAAGATTATCATTAGTGTTGTTCTGGGATCAGTCACTGGATTAGTTGGCTCCGTTTTGTTTGCTCTTATAGTCCGTTGCTTTGTTCAGTATCTGAATCAAACCCCAATACTGAAGGGGCCTGTCATATTTTCCCCCAAAATTTCTCCTAAGACACTCCAATCAGCTTTGGCAAAAGAAAACCATTTGCTTGGTTCAAGCCTAAATGGTAGATGTTACAGAACGGTGCTTGACAATGGGCTCACTATTGCAGTGAAGAGGCTAACACCCTTTGAACCCGGTTCTCCGGAGATAAGGAAAAAGAGGGTTAAGAGAGAAATACAGAAGGAGCTGGAAGTGCTTGCTAGTCTAAGGCATAGGAATTTGATGAGCTTAAGGGCTTATGTTCGTGAACCTGATAGTTTTTCCTTGGTTTATGATTATGTCGCCAAGGGCAGCCTTGCTGATGCAATGAACAGAGCTAAGGAAAGCGAGTTTCCGCCGCTTGGTTGGGAACATAGGCTGAGGATTGCTATTGGGGTGGCTAAGGGGCTTCAGTATCTTCATTCTACTTGTGTTCCTCAGATTCTGCACTACAACCTTAAGCCCTCCAATGTGATGTTGGATGCCGAGTTTGAACCTAGGTTGTCTGATTATGGATTGGTTAAGCTTCTACCCAACTTGAATAGAGCCACATCTCCCTACACTCCTCCTGAATGCTTGCATAATTGCAGCAGGTACAGTGAGAAAAGTGACATATTCAGTTTTGGGATGATCTTGGGTGTATTATTAACAGGAAGGGATCCCAGAGATGCATTCTTTGAAGAAGCAGGGAATGGAGGGAGCATGCGGTGTTGGCTAAGGCAGTTGCAGGAAGCAGGAGAACCCAAGGAAGCGCTCGATAAGAGCCTCGTTCCCGTGACGGTAGGGGATGAAGAAGGTGATGAAGCCGATATGCTCATGGCTGTCAGGGTGGCCGCAGCGTGCCTCTCAGATGTGCCTGCAAATAGGCCTTCCAGTGATGAACTTGTTCACATGCTAACGCAACTTCACAGTTTTTGA 1221 0.4505 MVSKRYSSSYYTKEFLTLLLLFLFSFQNSTVECQGRLNKQNYSESETEYPSRPSQDKEDLRKIIISVVLGSVTGLVGSVLFALIVRCFVQYLNQTPILKGPVIFSPKISPKTLQSALAKENHLLGSSLNGRCYRTVLDNGLTIAVKRLTPFEPGSPEIRKKRVKREIQKELEVLASLRHRNLMSLRAYVREPDSFSLVYDYVAKGSLADAMNRAKESEFPPLGWEHRLRIAIGVAKGLQYLHSTCVPQILHYNLKPSNVMLDAEFEPRLSDYGLVKLLPNLNRATSPYTPPECLHNCSRYSEKSDIFSFGMILGVLLTGRDPRDAFFEEAGNGGSMRCWLRQLQEAGEPKEALDKSLVPVTVGDEEGDEADMLMAVRVAAACLSDVPANRPSSDELVHMLTQLHSF 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00950 406 FunFam Inactive leucine-rich repeat receptor-like protein kinase CORYNE 110 201 - -
Accr8g00950 406 ProSiteProfiles Protein kinase domain profile. 118 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g00950 406 Gene3D Phosphorylase Kinase; domain 1 98 201 - -
Accr8g00950 406 SUPERFAMILY Protein kinase-like (PK-like) 121 400 IPR011009 -
Accr8g00950 406 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 27 402 - -
Accr8g00950 406 Coils Coil 160 180 - -
Accr8g00950 406 CDD STKc_IRAK 124 403 - -
Accr8g00950 406 Pfam Protein kinase domain 120 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g00950 406 Gene3D Transferase(Phosphotransferase) domain 1 202 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00950 Accr-Chr8 23910784 23912787 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00950 64 403 Receptor kinase-like Gene Family AT2G31880 32.410 5.16e-57 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Accr8g00950 Pkinase 9.8e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00950 - - gmx:102664172 571.622